Roseateles depolymerans: RD2015_2149
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Entry
RD2015_2149 CDS
T04166
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdp03400
]
RD2015_2149
Enzymes [BR:
rdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RD2015_2149
DNA repair and recombination proteins [BR:
rdp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RD2015_2149
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ALV06623
UniProt:
A0A0U3LEX5
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All DBs
Position
2515576..2518260
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AA seq
894 aa
AA seq
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MVRPPDETFALDAAHANAVFWDRLAERAAGWLEARGLPARDAVLLLPFAQHLAPARRAWM
KLCRWQPRIETTHSLASALGPSALPQALQLSFDAAIDALAARQLLSGQSWAQALRQEDPR
AFEAAVLRLVEAAHALARAAHLLSPASRQAFWSQARETVAAQSGAGQLERALLLVALEWA
ASDPRSPATDALFDLRPSAWLHLQAGGPDLLAQALLASAEAAGVPCLRLSADLPLDEAFS
HGRPPAHLEQALCDDFEDLAQCSAASVLDHLRSGRAPVALIAQDRVLLRRVRALLERQSV
GISDETGWTLATTAPAAQLMALLRAARRDATVDEWLAWLKTPLAAGLCERAGSGALSVLE
ARCRQRGWSSTTSVRDDRLPPTAARLWTLSREAVATLQAGGVRSLEDWLDLLKTLLKRLG
AEERLAAQPAGGPQLLDALWLKRSPWPGSAHEAVLKETTLSASEFTAWVSATLEAAQYVP
PLQGELQVMITPLARAMLRPFGAVVLPGADAATLGPVPAGPVLVSDALARQIGLPTLEDK
RDALASQFTQLLRAPAVTLLRCAHRGSEPLAASPLLDRLDLARQAAGLGPLPLWRDPRVE
QAIPVTLQRRARAVAPGRLPAALSASAVESLRQCPYQFFSRMLLGLREVQELDQQADKRD
YGTWLHAVLHQFHTERLANPDDGLSDEARLHHAARTQMQLLALSEAEFLPFSASFARFVP
AYLAWLQDQAAQGHAFLQGEVDREVHPWRDGDPALAPVRLRGRIDRIDEGPQGRRLIDYK
TGSLQTLKDKVSDPLEDTQLAVYATLMQAGDDAAGQAPAALHAAYLALDDTKGIAAVEHP
DVVRTAAELVQGLGDDLLAIHRGEALPALGEGVACEYCDMRGLCRRDDWEGAAP
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggccaccggacgagaccttcgcgctggatgccgcccatgccaacgccgtgttc
tgggaccgtctggcggagcgggccgctggctggctggaggcccgggggctgcctgcgcgg
gacgccgtgctgctgctgccctttgcccagcatctggccccggcgcggcgcgcctggatg
aagctctgccgctggcagccccgcatcgagacgacccacagcctggcgtccgcgctgggg
ccgagcgcgctgccgcaggcgctgcagctcagtttcgatgccgcgatcgatgcgctggcc
gcccgccagttgctgagcgggcagtcctgggcgcaggcgctgcgacaggaagacccgcgt
gcttttgaggcggctgtgctgcggctggtggaagcggcccatgcgttggctcgcgccgct
catctgctctcgccggccagccggcaggcgttctggtcgcaggcccgcgagacggtggcg
gcccagagcggagccggccaactggagcgggcgctgctgctggtggcccttgaatgggcc
gcctccgatccccgatccccggcgaccgatgcgctcttcgacctgcgtcccagcgcctgg
ctgcacttgcaggcgggcgggccggacctgctggcccaggcgctgctggcgtccgccgag
gctgccggggtgccttgcctgcgcctgagtgccgacctgccgctcgacgaagccttttcc
cacggacggccgccggcccacctggagcaggccctgtgcgacgattttgaagacctggcc
cagtgcagcgccgcatcggtgctggaccacctgcgaagcggccgtgcccccgtggccctg
attgcgcaggaccgggtgctgctgcgccgcgtgcgggccttgctcgagcggcaaagcgtg
ggcatttccgacgaaaccggctggacgctggccaccaccgcccccgccgcccagctcatg
gccttgctgcgggcggcccggcgcgacgccacggtggacgagtggctggcctggctcaag
acaccgctggcggccggcctctgcgagcgagcgggcagcggcgcgctgtccgtgctggag
gcgcggtgccgccagcgcggctggtcgtcgacgacctccgtccgcgacgaccggctgcct
cccacggcggcgcgcttgtggacactgtcccgggaggcggtcgccacgctgcaggcgggc
ggtgtgcgcagtctcgaagactggctggacctgctcaagaccctgctcaagcgactgggc
gcggaggagcggctggcggcgcaacccgccggtggaccgcagctgctggatgcgctctgg
ctcaagcgttcgccctggccagggtctgcccacgaagccgtgctgaaagagacgacgctc
agcgcgtcggagttcaccgcctgggtgtccgccaccctggaggccgctcaatacgtgccg
ccgctacagggcgagctgcaggtgatgatcacgccgctggcccgcgccatgctgcgtccg
ttcggggcggtggtgctgccgggcgccgacgccgccaccctgggtccggtgccggccggc
cccgtgctggtcagcgacgcactggcccgccagatcggactgccgaccctcgaggacaag
cgcgacgccctggccagccagttcacccagttgctgcgcgcgccggcggtcacgctgctg
cgctgcgcccatcgcggcagtgagccgctggcggccagcccgctgctggaccgtctggac
ctggcccgtcaggcggccgggctcgggccgctgccgctgtggcgcgacccacgggtggag
caggccattccggtgacattgcagcgccgtgcgcgggctgtcgcgccggggcgtctgccg
gcggccttgagtgccagtgcggtcgaatcgctgcggcaatgtccctatcagtttttctcc
cgcatgctgctgggtcttcgcgaagtgcaggagttggaccagcaggccgacaagcgcgac
tacggcacctggctgcatgcggtgctgcatcagttccacaccgagcgcctggccaacccg
gacgacgggctgagcgacgaagcgcgcctgcaccacgcggcgcggacccagatgcagttg
ctggcgctgtccgaagccgagttcctgccgttctccgccagctttgcgcgatttgtcccc
gcctatctggcgtggctccaggaccaggctgcacaagggcatgccttcctgcaaggcgag
gtggatcgagaggtccatccgtggcgggacggtgatccggccctcgcgccggtgcggctg
cgcggacgcatcgaccggatcgacgaaggtccgcaagggcgtcgcctcatcgactacaag
acgggcagcctccagacgctgaaggacaaggtgtcggacccgctggaagacacgcagctg
gccgtttatgccacgctcatgcaggctggcgatgatgcggcgggccaggccccggccgcg
ctgcatgcggcttacctggcactggacgataccaagggcatcgccgccgtcgagcatccg
gacgtggtccggaccgcggccgagctggtgcaggggctgggtgacgacctgctggctatc
catcgcggcgaggcactgccggcgctgggcgaaggcgtggcctgcgagtattgcgacatg
cgcggcctgtgccgccgggatgattgggaaggagccgcgccatga
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