Roseateles depolymerans: RD2015_2313
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Entry
RD2015_2313 CDS
T04166
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp00300
Lysine biosynthesis
rdp01100
Metabolic pathways
rdp01120
Microbial metabolism in diverse environments
rdp01230
Biosynthesis of amino acids
Module
rdp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RD2015_2313
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rdp01002
]
RD2015_2313
Enzymes [BR:
rdp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RD2015_2313
Peptidases and inhibitors [BR:
rdp01002
]
Metallo peptidases
Family M20
RD2015_2313
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
BNR_2
Motif
Other DBs
NCBI-ProteinID:
ALV06784
UniProt:
A0A0U3NEB8
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Position
complement(2703847..2705271)
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AA seq
474 aa
AA seq
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MSLPGRRLGDDHRSDGNLKASDLGKRDLRARDVRGRDLRPCNLRDNRAVSSALPPSPSVD
PTHPADDLGGRFRGPYSPLTPTFAAQRDTADVQTRTLALLEQLIARPSVTPDDAGCLTLI
GERLEVLGFRLERMDSGPDDFRVHNLWAVKDGSDPSAPRLVFAGHTDVVPTGELARWTSD
PFVPTVRGGQLYGRGAADMKTSLAAMVVAAEDFVAAHPHHAGSIAFLLTSDEEGPARDGT
VVCVEQLRQRGERLDFCIVGEPTSVERLGDTVKNGRRGSLSGKLRVMGIQGHVAYPHLAR
NPVHQAAPALAALAAMTWDAGNDYFPPTTFQISNIQAGTGAGNVIPGEVVVDFNFRFSTE
STPQGLRERVQALLEEHGLEYQLDWTLSGEPFLTPVGSLSAALSAAIAEETGVATELSTT
GGTSDGRFIARICPQVVEFGPLNASIHKINEYVPLDQIAPLTRIYCRTLEHLLL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttgagcctgcccgggcgtaggctgggcgacgatcaccgaagcgacggcaacctgaaggcc
agtgacctggggaagcgtgacctgagggcccgtgacgtgagggggcgcgatctcagaccc
tgcaacctaagagacaatagggcggtgagctccgccctgcccccttccccctcggttgac
ccgacgcaccccgctgacgacctcggcgggcgctttcgcggcccctattccccgctgacg
cccaccttcgccgcccagcgggacaccgccgatgtgcagacgcgcaccctcgccctgctg
gaacagctgatcgcccgcccatccgtcaccccggatgacgccggctgcctcaccctgatc
ggcgagcggctggaggtgctgggcttccggctggaacgcatggacagcggccccgacgac
ttccgtgtgcacaacctctgggcggtgaaggacggcagcgatccgtccgccccgcgcctg
gtctttgccggccacaccgatgtcgtgcccaccggcgagctggcccgctggaccagtgat
ccgttcgtgcccaccgtgcgcggcggccagctttatggacgcggcgcggccgacatgaag
acctcgctggccgccatggtggtggcagccgaggacttcgtcgctgcccacccgcaccat
gccggcagcatcgccttcctgctgaccagtgacgaggaaggccctgcccgcgatggcacc
gtcgtctgcgtggagcagctccgccagcgcggggaacggctggatttctgcatcgtcggc
gaaccgacttcggtcgaacggctgggtgacacggtcaagaatgggcgccgcggctcgctg
tccggcaagctgcgggtgatgggcatccagggccacgtggcctatccgcatctggcgcgc
aacccggtgcaccaggccgcccctgcgctggctgcactggcggccatgacctgggacgcc
ggcaacgactacttcccgcccaccaccttccagatctccaacatccaggccggcaccggt
gccggcaatgtgatccccggcgaggtggtggtggacttcaatttccgcttctccaccgaa
tccaccccgcaaggcctgcgcgaacgcgtgcaggcgctgctggaggaacacggcctggag
taccagctggactggaccttgtccggcgaacccttcctcacgccggtgggcagcctctcc
gccgccctcagcgccgccatcgccgaggaaaccggcgtggccacggaactctccaccacc
ggcggcacgtcggatgggcgcttcatcgcgcgcatctgtccgcaagtggtggaattcgga
ccgctcaatgcgagcatccacaagatcaacgaatatgtgccgctggaccagattgcgccg
ctgacgcgcatctactgccgcaccctggagcatttgctgctgtga
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