Roseateles depolymerans: RD2015_2328
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Entry
RD2015_2328 CDS
T04166
Name
(GenBank) Pectate lyase
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp00040
Pentose and glucuronate interconversions
rdp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RD2015_2328
Enzymes [BR:
rdp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
RD2015_2328
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Motif
Pfam:
Pectate_lyase
Ldl_recept_b
Motif
Other DBs
NCBI-ProteinID:
ALV06799
UniProt:
A0A0U3LFG2
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Position
complement(2723371..2724216)
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AA seq
281 aa
AA seq
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MNRLIERVSFGVLLHAVLALVALFLAAQAQAAPGVRTVPSCTKVNVSATIEVPAGTTWDG
TVVYGKWVCLVGTASNMKGTQSESQIPMFKLNNGATVKNVVIGDGSLGSGTNLAAGGADG
VHCYGQCNITNVYWADVGEDAATAIKLSGVTSKLTISGGAAFKAADKVFQHNGDGTVVIS
DFYVDNVGKLYRSCGNCSTQYARKVTVSGVRMGTVSAGGVGVNSSYDSKSGIAGQYDVAT
ISDLVYSGSKPKCITYVGTGKGSEPGKDTNSSNIARSCILK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgattgattgaacgtgtgtcgttcggcgtgctgctgcatgccgtgttggccctg
gtggcgcttttcctggccgcacaggcccaggccgctccgggcgtgagaaccgtgcccagt
tgtaccaaggtcaacgtcagcgccaccatcgaggtgccggcgggcaccacctgggacggg
accgttgtctatgggaaatgggtctgcctggtgggcaccgcttccaacatgaagggcacc
cagagcgaaagccagattccgatgttcaagctgaacaatggggccacggtgaaaaacgtg
gtgattggggacgggtcgctgggcagcggcaccaacctggccgccggcggcgctgatggc
gtgcactgctatggccagtgcaacatcaccaatgtctactgggctgacgtgggcgaggac
gcggccaccgcgatcaagctcagcggcgtcaccagcaagctgaccatctccggcggcgcc
gcgttcaaggccgctgacaaggtgttccagcacaacggcgacggcacggtggtcatctct
gacttctacgtggacaacgtcggcaagctctaccgctcctgcggcaactgctccacgcag
tacgcccgcaaggtgacggtgtccggcgtgcggatgggcaccgtgagtgccggtggcgta
ggggtgaacagcagctacgacagcaagtccggcatcgccgggcagtacgacgtggccacc
atctccgacctggtctattccggctccaagcccaagtgcatcacctatgtgggcaccggc
aagggcagtgagcccggcaaggacacgaacagcagcaacattgcgcggtcctgcatcctg
aaatga
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