Roseateles depolymerans: RD2015_2329
Help
Entry
RD2015_2329 CDS
T04166
Name
(GenBank) DNA-binding protein
KO
K10979
DNA end-binding protein Ku
Organism
rdp
Roseateles depolymerans
Pathway
rdp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RD2015_2329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdp03400
]
RD2015_2329
DNA repair and recombination proteins [BR:
rdp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RD2015_2329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
KMPT-N
Motif
Other DBs
NCBI-ProteinID:
ALV06800
UniProt:
A0A0U3NED0
LinkDB
All DBs
Position
2724610..2725566
Genome browser
AA seq
318 aa
AA seq
DB search
MPTSRAKSADKSAAKSPTRPQTRPKTRAKSQSRTQSKATSQPDAAPAPRRAIWKGAISFG
LVHVPVALYPATRDEEVDFDWLDKRTLDPVGYKRINKRTGREIDKEQIVKGVKQENGDYV
VLSEDEIRQAYPATTQTINIETFVPAEQISFVYLERPYYLAPVGKTAKVYALLREAMAQA
GLIAVARLVIHSKEHLAALLPAGPALMIGLMRWANEIRPAQDLDLPDEGVSANGIKPAEL
KMARQLIEEMTADWRPQDYQDEFTVAIRKLIEHKVKAGEAQSVEPLEEAPAQAEGNVVDL
TDLLKRSLGGGRKPAKRA
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcccacttctcgagccaaatccgcggacaaatccgccgccaagtcgccgacccggccg
cagaccagacccaagacccgggccaaatcccaatcccgcacccaatccaaggcgacgtcc
cagcccgacgccgcacccgccccacgccgcgcgatctggaaaggcgccatcagcttcgga
ctggtccacgtgccggtggccctgtaccccgccacccgggacgaggaggtggacttcgac
tggctggacaaacgcaccctcgacccggtgggctacaagcgcatcaacaagcgcaccggg
cgtgagatcgacaaggagcagatcgtcaagggcgtcaagcaggagaacggcgactacgtg
gtgctgagcgaagacgagatccgccaggcctatcccgccaccacccagacgatcaacatc
gagaccttcgtcccggccgagcagatttccttcgtctacctggagcggccctactacctg
gcgccggtgggcaagacggccaaggtgtatgcgctgctgcgggaggcgatggcgcaggca
gggctgatcgccgtggcgcggctggtcatccacagcaaggagcatctggccgcgctgctg
ccggccgggccggcgctgatgatcgggctgatgcgctgggccaacgagatccgtcccgcg
caagacctggacctcccggacgaaggcgtcagcgccaacggcatcaaaccggccgagttg
aagatggcccggcagttgatcgaggagatgaccgcggattggcgcccgcaggactaccag
gacgagttcactgtcgccatccgcaaactgatcgagcacaaggtcaaggcgggggaggcg
cagtcggtggagccgctggaggaggcgccggcgcaagccgaggggaatgtggtggacctg
accgatttgctcaagcgcagcctcggtggagggaggaagccggccaaacgggcgtga
DBGET
integrated database retrieval system
