Roseateles depolymerans: RD2015_2346
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Entry
RD2015_2346 CDS
T04166
Name
(GenBank) Ada
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RD2015_2346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rdp03000
]
RD2015_2346
03400 DNA repair and recombination proteins [BR:
rdp03400
]
RD2015_2346
Enzymes [BR:
rdp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RD2015_2346
Transcription factors [BR:
rdp03000
]
Prokaryotic type
Helix-turn-helix
AraC family
RD2015_2346
DNA repair and recombination proteins [BR:
rdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RD2015_2346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
HTH_18
AlkA_N
HTH_AraC
HhH-GPD
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ALV06817
UniProt:
A0A0U2U3L3
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Position
complement(2749960..2751801)
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AA seq
613 aa
AA seq
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MSENGQRLSPALPMMPSMVSPLTPHHCYPALLARDARFDGQWFVAVKTTGIYCRPICRVR
APKLENCLFFPTASQAEAARFRPCLKCRPELAPAARPWSAMDASEVLAREAARWLDECAP
DQASLPALATHLGVSERHVRRIFTAVHGVAPLQYLQTRRLLLAKQLLTDTRLPVAQVALA
AGFSSLRRFNAAFSEHYRLSPTALRDGGARRRPASEDDALELRLDLRPPLLTTALLQFLA
ARAVPGVEQVDLAGLRVLRSVRLSLADPPDVLGWVTVALPPDGAERPQVRVRLSASLWPH
VAALMPKLRRWLDLDADPHAIAAALGDELGPSALGLRLPGTLDRFELAVRAVLGQQVTVA
AARTLATRLVAAFGEPLPAALDAPAPVTHAFPAAARLASATVDEVAALGMPGRRAQALIH
LAAEWPRLAFAQGRGTVEDAMAELAALPGLGPWTAHYMLMRGWSWPDAFLPGDVVLRQRL
ESRAGDSMRPAALVAAAQRYAPYRSYAVLQLWREASALGKAGTSTSTSTSTSASAGTSTG
SIGSNSSTGTTSSSISTGSTASKSSTGTPGSTSSTSSNSSNRSTGTISTTGRTSASNRKR
IRRSASLAEGPLS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaaacggccagcgcctgtcacccgcgctgcctatgatgcccagcatggtctcc
cctctcactccccaccattgctacccggccctgctggcccgggacgcgcgttttgacggc
caatggttcgtggcggtgaagaccaccggcatctactgccggccgatctgccgggttcgt
gcgcccaagctggaaaactgcctgttctttcccacggccagccaggcggaagctgcacgc
ttcaggccctgcctgaagtgccgccctgaattggcgcccgccgcccgtccgtggagcgcg
atggacgccagcgaggtgctggcccgagaggccgcacgctggctggatgaatgcgcgccg
gaccaggccagcctgccagcgctggccacgcatctgggggtgagcgagcggcatgtgcgg
cgcatcttcaccgccgtgcatggggtggcgccgctccaatacctgcagacccgccgtctg
ctgctggccaagcagttgctgaccgacacccggctgccggtcgcccaggtggcgctggcg
gcggggttttccagcctgcgtcgattcaatgcggcgttttcggaacattaccgcttgagt
ccgaccgccctgcgggacggcggagcgcgacgccgtccggcctcggaggacgacgcgctt
gaactgcgtctggatctgcgcccgccgctgctgacgactgccctgctccagttcctggcc
gcgcgggcggtgccgggggtggagcaggtggaccttgcggggctgcgggtgctgcgcagc
gtgcgtctgtcgctggccgacccgcctgacgtcctgggatgggtgaccgtagcgctcccg
cccgacggcgctgagcgtccccaagttcgcgtgcggctgagcgcatcgctctggcctcac
gtggcggccttgatgccgaagttgcggcgctggctggacctggacgcggacccgcatgcc
attgccgccgccctgggcgacgagctgggcccctccgccctggggctgcggctgccgggt
acgctggaccgctttgaactggcggtgcgggcggtgctgggtcagcaggtcacggtggcc
gcggcgcggaccttggcaacgcgcctggtggcggcttttggggaaccgctgcctgcagca
ctggacgcaccggcgccggtcacccatgccttccccgctgccgcccgcctggcctccgcc
acggtggatgaggtggccgcgctgggcatgccgggcaggcgggcgcaggccctgatccat
ctggcggccgaatggccccgactggcgtttgcacagggccgcggcacggtcgaggacgcg
atggccgaactggcggcgctgccggggctgggcccctggacggcgcactacatgctgatg
cgcggctggagctggcccgatgccttcctgccgggcgatgtggtgctgcgccagcggctg
gaaagccgcgctggggattcgatgcggccagccgcgctggtcgccgccgcccagcgttat
gcaccgtaccgcagttacgcggtgctgcagttgtggcgggaagcgagcgcgctggggaag
gccggcaccagcaccagcaccagcaccagcactagcgccagcgccggtaccagcacgggc
agcatcggtagcaacagcagcacgggcacaacgtctagcagcatcagcacgggctccaca
gctagcaagagcagcacgggcacccctggtagcaccagcagcaccagcagcaacagcagc
aacaggagcaccggcaccatcagcaccaccggcagaactagcgccagcaaccgcaagcgc
atccgccgtagcgcgtctctcgcggaaggacccctctcatga
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