Roseateles depolymerans: RD2015_2369
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Entry
RD2015_2369 CDS
T04166
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp00260
Glycine, serine and threonine metabolism
rdp00460
Cyanoamino acid metabolism
rdp00630
Glyoxylate and dicarboxylate metabolism
rdp00670
One carbon pool by folate
rdp00680
Methane metabolism
rdp01100
Metabolic pathways
rdp01110
Biosynthesis of secondary metabolites
rdp01120
Microbial metabolism in diverse environments
rdp01200
Carbon metabolism
rdp01230
Biosynthesis of amino acids
rdp01240
Biosynthesis of cofactors
rdp04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RD2015_2369
09102 Energy metabolism
00680 Methane metabolism
RD2015_2369
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RD2015_2369
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RD2015_2369
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RD2015_2369
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RD2015_2369
Enzymes [BR:
rdp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RD2015_2369
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ALV06840
UniProt:
A0A0U3CDP1
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All DBs
Position
complement(2771963..2773213)
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AA seq
416 aa
AA seq
DB search
MFDRNQHTLANVDAEVFAAIQQETQRQEDHIELIASENYTSPAVMQAQGSQLTNKYAEGY
PGKRYYGGCEYVDIVEQLAIDRLKQLFGAEYANVQPNSGSQANQGVFFALLQPGDTIMGM
SLSEGGHLTHGMPLNMSGKWFNVISYGLNDKEEIDYDAMEALAREKKPKLIIAGASAYAL
RIDFERFSRVAKEIGAYFMVDMAHYAGLIAAGVYPNPLPFADVVTSTTHKSLRGPRGGII
LMNDEAIAKKINSAIFPGIQGGPLMHVIAGKAVAFKEALTPEFKAYQQQVVANAKVLAET
LIERGLRIVSGRTESHVMLVDLRPKGLTGKEAEAILGAAHMTCNKNGIPNDPQKPMVTSG
IRLGTPAMTTRGFKEEQARQTAHLIADVLDNPHDEANLAKVREQVAELARRFPVYR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaccgcaatcaacacaccctcgccaacgtggacgcggaagtctttgccgcgatc
cagcaggaaacccagcgccaggaagatcacatcgagctgatcgcttccgaaaactacacc
tccccggcggtgatgcaggcccagggcagccagctgaccaacaaatatgccgagggctac
cccggcaagcgctactacggcggctgcgaatacgtggacatcgtggaacagctggccatc
gaccgcctgaagcagctgttcggcgccgaatacgccaacgtgcaacccaattccggctcg
caggccaatcagggcgtgttcttcgccctgctgcagcccggtgacaccatcatgggcatg
agcctgtccgaaggcggtcacctgacccacggcatgccgctgaacatgagcggcaagtgg
ttcaacgtcatcagctacggtctcaacgacaaggaagagatcgactacgacgccatggaa
gccctggctcgcgagaagaagcccaagctgatcatcgctggcgcctccgcctacgccctg
cgcatcgacttcgaacgcttctcccgcgtggccaaggagatcggcgcctacttcatggtg
gacatggcccactacgccggcctgatcgctgctggcgtctacccgaaccccctgcccttt
gccgacgtggtcacgtccacgacgcacaagagcctgcgcggcccgcgcggcggcatcatc
ctgatgaacgacgaggcgatcgccaagaagatcaactcggccatcttccccggcatccag
ggcggcccgctgatgcatgtcatcgccggcaaggccgtggccttcaaggaagcgctgacc
ccggagttcaaggcctaccagcagcaggtggtggccaatgccaaggtgctggctgaaacg
ctgatcgagcgcggcctgcgcatcgtctccggccgcaccgaaagccatgtgatgctggtg
gacctgcgtcccaagggcctgaccggcaaggaagcggaagccatcctgggcgcggcccac
atgacctgcaacaagaacggcatcccgaacgacccgcaaaagccgatggtcaccagcggc
atccgcctgggcacgccggccatgacgacccgcggtttcaaggaagagcaggcccgccag
accgcccatctgatcgccgacgtgctggacaacccgcacgacgaagcgaacctggccaag
gtgcgcgagcaagtggccgaactggcccgccggttcccggtctaccgctaa
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