KEGG   Roseateles depolymerans: RD2015_2741
Entry
RD2015_2741       CDS       T04166                                 
Name
(GenBank) DEXH box helicase, DNA ligase-associated
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rdp  Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:rdp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rdp03400]
    RD2015_2741
Enzymes [BR:rdp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RD2015_2741
    5.6.2.6  RNA 3'-5' helicase
     RD2015_2741
DNA repair and recombination proteins [BR:rdp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RD2015_2741
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: ALV07206
UniProt: A0A0U3D0T5
LinkDB
Position
complement(3224977..3227661)
AA seq 894 aa
MTAPAQWLEQRGWSAFDFQREVWAAMAEGRSGLLHASTGSGKTLAVWLGALAALPAQGVQ
GRGDKPPPLSVVWITPMRALAADTYRALEQPMRDLLPDWTLGLRSGDTTASQRAAQDRRL
PTVLVTTPESLSLLMSRADAPDLLGHVRLAVVDEWHELMGNKRGVQTQLALARLRRFQPG
LMCWGLSATLGNLDEALRTLLGSTPQSQPPALVQGATDKTLVIDTLLPATAERFAWAGHM
GLRMLPQVVQAIEESDSCLVFTNMRSQAERWYRALLEARPDWAGVLALHHGSLDREVREW
VEVGLKEGRIKAAVCTSSLDLGVDFLPVDRVLQIGSAKGVARLVQRAGRSGHAPGRPSRI
TLVPTHSLELVEAAAAREAVQTGQVEARHSPREPLDVLVQHLVTVALGGGFRPEELLAEI
RGTVAYEHISADAWQWCLDFVRQGGPSLAAYPDYHRVVPDEQGVWRVPDARLARRHRVNI
GTIVSDAAMTVQYLGGGRLGTVEEGFIARLKPGDAFMFSGRLLELVRVEQMTALVRRATA
GRVALPRWNGGRMPLSSTLADAVLRQLQAADEGRYDSPEMDCVRPLIDIQRRWSGVPTPG
VLLAETFKSREGWHLFLYPFAGRQVHLGLAGLLAWRAAQPETGTFSIALNDYGIELLSAK
PIDWQERLPGLLGLPPMEQLLAEVLASLNATELARRRFREIARVAGLIFQSHPGERRSNR
QLQASASLFFEVFQQYDPGNQLLKQAERELLTQELDVQHLAQALGRMQGQTLRIHALRKP
TPLAFPLMVERFREKLSNESLADRIARMVSALERSAGGETVGTSHERADQVFARPDAPDM
AVGQSLALETRGDTSGDRAPSAGSGTRSTARERAKAKAKAKAKPRKPRLRLVNV
NT seq 2685 nt   +upstreamnt  +downstreamnt
atgacggcgcccgcgcaatggctggagcagcgcggctggtccgcattcgacttccagcgc
gaagtgtgggcggccatggccgaggggcgcagcggcttgctgcatgccagcaccggcagc
ggcaagacgctggccgtgtggctgggcgcgctggcggcgctgccggcccagggggtgcag
ggccgtggcgacaagccgccgcccttgtccgtcgtgtggatcacgccgatgcgggctctg
gcggccgacacctaccgcgccctggagcagccgatgcgggacctgctgccggactggacc
ctgggcctgcgcagcggcgataccaccgccagccagcgcgccgcgcaggaccggcggctg
ccgacggtgctggtgaccacgccggagagcctgtcgctgctgatgtcgcgggccgatgcg
ccagacctgctcggtcacgtgcggctggcggtggtggacgagtggcatgaactgatgggc
aacaagcgcggcgtgcagacgcagctggcgctggcccggctgcggcgcttccagccgggc
ctgatgtgctggggcctgtccgccacgctgggcaatctggacgaagcgctgcggaccctc
ctgggatcgacaccgcagtcccagccgcccgccctggtgcagggcgccacagacaagacg
ctggtgatcgacaccctgttgccggccaccgcggagcgtttcgcgtgggcgggccacatg
ggcctgcgcatgctgccgcaggtggtgcaggccatcgaggagagcgacagctgcctggtc
ttcaccaacatgcgctcccaggccgagcgctggtaccgggcgctgctggaggcccggccg
gactgggcgggggtgctggcgctgcaccatggctcgctcgaccgggaggtgcgcgaatgg
gtggaggtggggctgaaggagggccgcatcaaggcggcggtctgcacctccagcctggac
ctgggcgtggatttcctgccggtggaccgggtgctgcagatcggctcggccaagggcgtg
gcgcgcctggtgcagcgggccggtcggtccggccatgcgcccgggcggccgtcccgcatc
acgctggtgcccacgcacagcctggagctggtggaagcggccgccgcgcgggaagccgtg
cagaccgggcaggtggaggcacgccacagtccgcgggagccgctggacgtgctggtgcag
cacctggtcaccgtggcactgggcggcggtttccgtccggaggaactgctggccgagatc
cgcggcacggtcgcttatgaacacatcagcgccgatgcctggcagtggtgtctggacttc
gtgcggcagggcgggccgtcgctggcggcctatccggactaccaccgcgtggtgccggat
gagcagggcgtgtggcgggtgccggatgcacggctggcgcgtcgtcatcgggtcaacatc
ggcaccatcgtcagtgatgccgccatgacggtgcagtacctgggcggcgggcggctgggc
acggtggaggagggcttcatcgcccgcctcaagcccggcgatgccttcatgttcagcggc
cggctgctggagctggtgcgggtggagcagatgaccgcgctggtgcgccgcgccaccgcc
gggcgcgtggcgctgccgcgctggaacggcggccgcatgccgctgtccagcacactggcc
gatgcggtgctgcggcaactgcaggccgccgacgagggccgttacgacagcccggagatg
gactgcgtgcgcccgctgatcgacatccagcggcgctggtccggtgtgccgacgccgggc
gtgctgctggccgagaccttcaagtcgcgcgagggctggcatctgttcctctatcccttt
gccggacggcaggtgcatctgggcctggccggcctgctggcctggcgcgcggcgcagccg
gagaccggcaccttctcgattgcgctgaacgactacggcatcgagctgctcagcgccaaa
ccgatcgactggcaggagcggctgccgggcctgctggggctgccgccgatggagcaactg
ctggccgaggtgctggccagcctcaatgccaccgaactggcgcgccgccggttccgggag
atcgcgcgggtggcggggctgattttccagagccatccgggcgagcgccgcagcaaccgt
cagctgcaggcttcggccagcctgttcttcgaggtcttccagcagtatgaccccggcaac
cagttgctcaaacaggccgaacgcgagctgctgacgcaggagctggacgtccagcatctg
gcgcaggcgctgggtcggatgcagggccagaccctgcgcatccatgcgctgcgcaagccc
acgccgctggccttcccgctgatggtggagcgcttccgggagaagctgagcaacgagtcg
ctggcggaccggatcgcgcgcatggtgtccgcgctggagcgcagcgctggtggcgagacg
gtcggcacgtcgcatgaacgggccgatcaggtcttcgcccggccggatgcgccggacatg
gcggtggggcagtcgctggcgctggagacgcgcggggatacctccggcgaccgggcgccg
tcggctgggagcggcactcggtcaacggcccgggaacgagccaaggcgaaggccaaggcc
aaggcaaagccgcgcaagccccggttgcggctggtgaatgtctga

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