Roseateles depolymerans: RD2015_2908
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Entry
RD2015_2908 CDS
T04166
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rdp03016
]
RD2015_2908
Enzymes [BR:
rdp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RD2015_2908
Transfer RNA biogenesis [BR:
rdp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RD2015_2908
Prokaryotic type
RD2015_2908
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ALV07371
UniProt:
A0A0U3N586
LinkDB
All DBs
Position
complement(3413548..3414501)
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AA seq
317 aa
AA seq
DB search
MNAVVPRPKIEKRAVHGVLMLDKPLGLSSNDALQKVKRLMRAEKAGHTGTLDPLATGLLP
LTFGAATKFSQVSLEADKGYRATLQLGITTTTGDGEGEILQQRPVDVTPEQIQSACEAFK
GPISQLPPMYSALKHQGRALYELAREGITVERQPRLITIHALDIVQWQPEASLLVIDVRC
TKGTYIRTLAEDIGERLGCGAHLAALRRTGSGPVRVDQAVTLEQLEAMDDTARLAQLTAP
DSLLGEWPEVVLSNEEAGRFLSGMRRRVALADAPQVRVYGQMPRAFLGSGHITGGELIAD
RLLSPAEIASMLMQAAG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtcgttccccgccccaagatcgaaaagcgcgccgtgcacggcgtgctcatg
ctggacaagccgctgggcctgtccagcaatgacgcattgcagaaggtcaagcgcctgatg
cgggcggagaaggccggccataccgggaccctggacccgctggccaccggcctgttgccg
ctcacttttggtgcggccaccaagttcagccaggtcagcctggaggccgacaagggctac
cgcgccacgctgcagctgggcatcaccaccaccaccggcgacggcgaaggcgagatcctc
cagcagcgcccggtggacgtgacgcccgagcagatccagtcggcctgcgaggccttcaag
ggcccgatctcgcagttgcccccgatgtattccgcgctcaagcaccagggccgcgccctg
tacgagctggcgcgcgaaggcatcacggtcgagcggcagccccgcctgatcacgattcac
gcgctcgacatcgtccagtggcagcctgaggcctcgctgctggtcatcgacgtgcgctgc
accaaaggcacctacatccgcaccctggccgaggacatcggcgagcggctcggctgcggg
gcgcatctggcggcgctgcggcgcaccggcagcggcccggtccgggtcgatcaggccgtc
acgctggagcaactggaagccatggacgacaccgctcgcctagcccagctgaccgccccc
gacagcctgctgggcgaatggcccgaggtggttttgagcaacgaggaggctggccgcttc
ctctccggcatgcgccgccgtgtggcgctggccgatgccccgcaagtgcgggtctacggc
cagatgccgcgcgccttcctgggcagcgggcacatcaccgggggcgagctgatcgccgac
cggttgctgagccccgccgagattgcctccatgctcatgcaggcggcaggctga
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