Roseateles depolymerans: RD2015_2914
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Entry
RD2015_2914 CDS
T04166
Name
(GenBank) Lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp00330
Arginine and proline metabolism
rdp01100
Metabolic pathways
rdp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RD2015_2914
Enzymes [BR:
rdp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
RD2015_2914
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DegT_DnrJ_EryC1
WHH
Beta_elim_lyase
DUF5623
Motif
Other DBs
NCBI-ProteinID:
ALV07376
UniProt:
A0A0U3NG09
LinkDB
All DBs
Position
complement(3421600..3423864)
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AA seq
754 aa
AA seq
DB search
MTPRFRFPIVIIDEDYRSENTSGLGIRALADAIQKEGFEVLGVTSYGDLSQFAQQQSRAS
AFILSIDDEEFSAGPELDPAVLNLRKFIQEIRFKNADIPIYVYGETRTSQHLPNDVLREL
HGFIHMFEDTPEFVARHIIREAKSYLDGLAPPFFKALMDYAQDGSYSWHCPGHSGGVAFL
KSPVGQMFHQFFGENMLRADVCNAVEELGQLLDHTGPVAESEKNAARIFNADHCFFVTNG
TSTSNKMVWHHTVAPGDVVVVDRNCHKSILHSIIMTGAVPVFMTPTRNHYGIIGPIPEQE
FEAETIRKKIARNPLLAGVDPKTVKPRIMTLTQSTYDGVLYNTETIKSKLDGWIDTLHFD
EAWLPHAAFHSFYGSYHAMGKHRARPKTAMVYATQSTHKLLAGISQASQVLVQDSQNVKL
DRHLFNEAYLMHTSTSPQYSIIASCDVAAAMMEPPGGTALVEESISEALDFRRAMRKVEK
DYGKDWWFKVWGPEKLATDGVGKPADWMLKTNEKWHGFGPIEEGFNMLDPIKSTIITPGL
DMSGKFAKTGIPASIVTKFLAEHGVVVEKTGLYSFFIMFTIGITKGRWNTLLTALQQFKD
DYDRNAPIWRILPEFVAAFPRYERMGLRDLCQSIHEAYASGDIARLTTEVYLSDLEPAMK
PSDAYAHIAHRKTERVEIDHLEGRVTTALLTPYPPGIPLLIPGERFNKKIVEYLKFTRDF
NARFPGFATDVHGLVAEKDDEGRTRYYVDCVVDQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgcgtttccgctttcccatcgtcatcattgacgaggactaccgctccgagaac
acctcgggtctgggcatccgcgccctggccgacgccatccagaaggaaggcttcgaagtg
ctgggcgtcaccagctatggcgacctgagccagttcgctcagcagcagagccgggccagc
gccttcatcctgtccatcgacgacgaggaattcagtgccgggccggaactcgacccggct
gtgctgaacctgcgcaagttcatccaggagatccgcttcaagaatgcggacatccccatc
tatgtctacggtgagacccgcacctcccagcatctgcccaatgatgtgctgcgtgagttg
catggtttcatccatatgttcgaggacaccccggaatttgtggcccgccacatcatccgc
gaggccaagagctacctggacggcctggcgcctcccttcttcaaggcgctgatggactat
gcgcaggacggctcctattcctggcactgccccgggcactccggcggcgtggccttcctg
aagagcccggtcggccagatgttccaccagttcttcggtgagaacatgctgcgcgccgac
gtgtgcaatgcggtggaagagctgggccagttgctggaccataccggtccggtggccgag
agcgagaaaaacgccgcccgcatcttcaatgccgaccactgcttcttcgtcaccaacggc
acctcgacctccaacaagatggtctggcaccacacggtggcgccgggcgatgtggtggtg
gtggaccgtaactgccacaagagcatcctgcacagcatcatcatgaccggcgcggtgccg
gtcttcatgacgcccacgcgcaaccactacggcatcatcggcccgattcccgagcaggaa
ttcgaggcggagaccatccgcaagaagattgcccgcaatccgctgctggccggcgtggac
cccaagacggtcaagccgcgcatcatgacgctgacccagagtacctacgacggcgtgctc
tacaacaccgagaccatcaagagcaagctggacggctggatcgacacgctgcacttcgac
gaagcctggctgccgcatgcggccttccacagcttctacggctcctaccatgcgatgggc
aagcaccgcgcgcgtcccaagaccgccatggtctacgccacgcagtcgactcacaagctg
ctggccggcatctcgcaggcatcgcaggtgctggtgcaggattcgcagaacgtgaagctg
gaccggcatctgttcaacgaagcttatctgatgcacacgtccaccagcccgcagtactcg
atcatcgcgagctgcgacgtggccgcggcgatgatggagcctcccggcggcaccgcgctg
gtggaggagtccatctccgaagcgctggacttccgccgcgccatgcgcaaggtggagaag
gactacggcaaggactggtggttcaaggtctggggccctgagaagctggccacggacggc
gtcggcaagcccgccgactggatgctgaagaccaacgagaagtggcacggtttcggcccg
atcgaagagggcttcaacatgctggacccgatcaagtccaccatcatcacgcccgggctg
gacatgagcggcaagttcgccaagaccggcatcccggccagcatcgtcaccaagttcctg
gccgagcatggcgtggtggtggagaagaccgggctctactcgttcttcatcatgttcacc
atcggcattaccaagggccgctggaacacgctgctgaccgcgctgcagcagttcaaggac
gattacgaccgcaatgccccgatctggcgcatcctgccggagttcgtggcggccttcccg
cgttatgagcgcatgggcctgcgcgatctgtgccagagcatccatgaggcctatgcctcc
ggcgacatcgcccgtctgacgaccgaggtctacctgtccgacctcgagccggcgatgaag
cccagcgatgcgtatgcgcatatcgcccaccgcaagaccgagcgggtggaaatcgaccat
ctggaaggccgcgtgaccacggcgctgctgacgccgtacccaccgggcattccgctgctg
atcccgggtgagcgcttcaacaagaagattgttgaatatctgaagttcacccgtgacttc
aatgcgcgcttcccgggcttcgcaaccgatgtgcatggtctggtcgccgaaaaggacgac
gagggccgcacgcggtattacgtggactgcgttgtggaccagtga
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