Roseateles depolymerans: RD2015_2974
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Entry
RD2015_2974 CDS
T04166
Name
(GenBank) LacI family transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rdp03000
]
RD2015_2974
Transcription factors [BR:
rdp03000
]
Prokaryotic type
Helix-turn-helix
LacI family
RD2015_2974
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ALV07436
UniProt:
A0A0U3MIP5
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Position
3502392..3503417
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AA seq
341 aa
AA seq
DB search
MSQPSAPKRRRATGRVTLQDVAVAAGVSPITASRALRGERGVAADLVERVQVAVRELGYV
PDPAARALASAKSNQVVLLVPLLSNALFVDLLDAAQRTLLQAGYQSMIGVTHYQPEEEEA
LLRTYLMNRPAGLLVTGFDRTDTARSLLQGSGVPCVHLMENRAGDGLYSVGFSQEDAGRA
MTQALMDKGYRRIAFAAAQLDPRTLQRATGYRAALGALHDPKLEFMDAAPSSFALGAQMF
DRVLAQAPEVDAIFFNNDDLAQGALLQALRRGIAVPTQVAVAGFNDLIGGEQMLPPLSTV
RTPRGEIGLKAAEMLIALMRGEPVEQPCVDLGFELLMRGSC
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagccttccgccccaaaacgacgccgcgccaccgggcgggtgaccttgcaggat
gtggctgtggcggcgggtgtgagcccgatcaccgcgtcgcgcgccctacggggggaacgc
ggcgtcgcggcggatctggtggagcgggtgcaggtggccgtgcgggagctgggctatgtg
ccggacccggccgcacgcgcgctggcctcggccaagagcaaccaggtggtgctgctggtg
ccgctgctgtccaacgcgctgttcgtggatctgctggatgcggcgcagcgcacgctgctg
caggccggctaccagagcatgatcggcgtgacgcactaccagccggaggaagaggaagcg
ctgctgcgcacctatttgatgaaccgtccggccgggctgctggtcaccggcttcgaccgc
accgacacggcccgcagcctgctgcagggcagcggcgtgccctgcgtgcatctgatggag
aaccgcgcgggcgacggtttgtattcggtgggcttctcgcaggaggacgccggccgtgcg
atgacgcaggcgctgatggacaagggctaccggcgcattgccttcgccgcggcgcaattg
gacccacgcaccttgcagcgggccacgggctaccgggcggcgctgggcgcattgcatgac
ccgaagctggagttcatggatgccgcgccctcgtcgttcgcactgggtgcgcagatgttc
gaccgcgtgctggcccaggcgccggaggtggacgcgatcttcttcaacaacgacgacctg
gcccagggcgccctgctccaggccctgcggcgcggcattgcggtgccgacccaggtggcg
gtggcgggcttcaacgacctgatcggcggcgagcagatgttgccgccgctctcgacggtc
cgcacgccccgcggcgagatcggcctgaaggcagcggagatgctgattgcgctgatgcgc
ggcgagccggtggagcagccctgcgtggacctggggtttgagctgctgatgcgcggcagt
tgctga
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