Roseateles depolymerans: RD2015_3015
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Entry
RD2015_3015 CDS
T04166
Name
(GenBank) Transcriptional regulator, NifA subfamily, Fis Family
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rdp03000
]
RD2015_3015
Transcription factors [BR:
rdp03000
]
Prokaryotic type
Helix-turn-helix
Other families
RD2015_3015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_5
GAF_2
Mg_chelatase
AAA_2
HTH_8
HTH_IclR
HTH_AraC
AAA_16
Fea1
Motif
Other DBs
NCBI-ProteinID:
ALV07477
UniProt:
A0A0U3E2R8
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All DBs
Position
3549587..3551677
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AA seq
696 aa
AA seq
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MPTGSVSHGEVELAPAHNPFFGHSPNVRRSDKSPMNATSLSSRFAAALEATLEQLPCDAA
AILKLEGDALHPLAVHGLAEEAMQRRFPLAGHPRLAALVRARGVHRFPPDCGLPDPYDGL
VEHPDTPADQLLPVHDCMGAPLTIGGRLWGVATFDALRPGAFDAIQEETATAVIAALQMH
LEAIVADEARQRRADNRSATPRKRPSIGSPTAAAAAAAAAAAAAAAVDADADAWADSSEF
APMGEASDASAAPSVVGVARALEATDGLPSRTTSSVSTIVREIRQLEGRSAAWQQLIREV
DTVAPSDLTVLILGETGVGKELVAQRLHEGSRRSTRPLVQVNCAALPETLADSELFGHRR
GAFTGATQDRMGKFELAAGGTLMLDEVGELPLTVQAKLLRVLQSGDIQRPGSDRPLRVDV
RVVAATNRDLRAEVAAGRFRADLYHRLAVYPVHVPPLRARGRDVLALAGVFLEENQHRLG
ARNLRLSPAARDALLRHDWPGNVRELEHLISRAALRAWAGPRKAQRWTTIEPEHLGLEPI
GDALSAAMQGRAYREQVGEFGEGPGEWFGQRVGQQVDQRVGERVGERVGERVGERFVAPV
REGIVEPVGQRVVERDGEPMGERIDERIGERVDGSGPSLQAPQTLRAATEAFQRQWLAAL
LRRHPGSLAAAAREAGMDRSNFHRLIKKWGLTEARR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccgggtcggtgagccatggcgaggtcgaactggcaccagctcacaaccccttc
ttcggtcacagcccaaacgtccgcagatccgacaagtcgcccatgaacgccaccagcctt
tcctcccgctttgccgccgcgcttgaagccaccctcgagcagttaccgtgtgacgcggca
gcgatcctgaaactggagggcgacgcgctgcacccactggccgtccatgggctggccgaa
gaagccatgcagcgacgtttcccgctggctggccatccgcggctggccgccctggtgaga
gcccgaggcgttcaccgcttccccccggactgcggactgcccgacccctatgacggtctg
gtcgagcatccagacacgcccgcggatcagttgctcccggtccacgactgcatgggcgct
ccgctgaccattggcggacgactgtggggcgtggcgacgttcgatgcgctgcgtccgggt
gcctttgatgcgatccaggaagagaccgcgaccgcagtgatcgcggcgctgcagatgcac
ctggaagcgatcgtggcggatgaagccaggcagaggcgggccgataaccgatcggcgacc
ccgcgcaaacggccatccattggcagcccaactgccgcagcagccgcagcagccgcagca
gccgcagcagccgcagctgttgatgctgatgctgatgcatgggccgactcgtccgaattt
gctccgatgggggaggcgtcggatgcttccgccgcgccgtccgtggtcggcgttgcccgc
gcgctggaagcgacggacggcctgccctctcggacgacttcgtcggtatcgaccatcgtg
cgggaaatccgtcagctcgaaggccgcagcgctgcgtggcaacaactcatccgtgaagtg
gacaccgtggcgccctcggacctgacggtgctcatcctgggcgagaccggggtaggcaag
gaactggtggcgcagcgactgcatgaagggtcccggcgatcgacgcgcccgctggtccag
gtgaactgcgcggccctgccggagacgctggccgacagcgaactcttcggccaccgccgc
ggggcgttcactggcgccacccaggaccgcatgggcaagttcgagctggcggccggaggg
acgctcatgctggacgaagtgggtgaactgccattgacggtgcaggccaaactgctgcgg
gtgctgcagagcggagacatccagcgaccgggcagcgaccgcccgcttcgagtggacgtc
cgtgtcgtggccgcgaccaaccgggacctgcgggcggaggtcgcagcgggtcgatttcgc
gccgacctgtatcaccggctggcggtctatccggtgcatgtgccgcccctgcgggcacgg
ggacgggatgtcctggcactggccggagtgttcctggaagagaaccagcaccgactgggc
gcccgcaacctgaggctgtcgcccgccgcccgggacgcgctgcttcgccacgactggccg
ggcaatgtgcgagaactggaacacctgatcagtcgcgccgcgctgcgggcgtgggcggga
ccgcgaaaggcgcagcgctggacaacgatcgagccggagcatctgggactggaaccgatc
ggggatgcgctgtcggcagcgatgcagggccgggcttaccgggagcaggtgggtgaattc
ggtgaagggccaggtgaatggtttggtcagcgagtcggccaacaggtcgaccaacgggtc
ggtgaacgggtcggtgaacgggtcggtgaacgggtcggtgaacggtttgttgcaccggtc
cgtgaagggattgttgagccggtcggtcaacgggttgttgagcgggatggtgaaccgatg
ggtgagaggatcgacgagcgaatcggtgagcgggtcgatgggtcgggcccttcccttcaa
gcccctcaaacgctgcgcgccgcgaccgaagcgttccagcgccaatggctcgcggccctt
ctgcgacgccatccaggttcgctggccgcggccgcccgcgaggccgggatggatcgaagc
aacttccatcgcctcatcaaaaagtggggcctgacggaggctcgccgctga
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