Roseateles depolymerans: RD2015_3154
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Entry
RD2015_3154 CDS
T04166
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp03030
DNA replication
rdp03430
Mismatch repair
rdp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RD2015_3154
03430 Mismatch repair
RD2015_3154
03440 Homologous recombination
RD2015_3154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rdp03032
]
RD2015_3154
03400 DNA repair and recombination proteins [BR:
rdp03400
]
RD2015_3154
Enzymes [BR:
rdp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RD2015_3154
DNA replication proteins [BR:
rdp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RD2015_3154
DNA repair and recombination proteins [BR:
rdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RD2015_3154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
ALV07614
UniProt:
A0A0U3L8H9
LinkDB
All DBs
Position
complement(3705535..3706596)
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AA seq
353 aa
AA seq
DB search
MVTAAVSDDTGDITALARDGQLPLPWLAGPLQQALTQGRSHALLLQGPAGVGQFDLALLL
AQAWLCEQRTAPDQPGCGRCASCHLLRSRSHPDFMVVLPEALREPLGFGAMEAEGSEPKA
SKTKPSREIKIESIRQVLSFAQVSAARGKAKVVVVYPAEALNTVAANALLKTLEEPQGLL
RFVLASAAPQQLLPTIRSRCQPLQMALPARDAAVSWLSGQGVASADVLLDATGGRPQEAL
LWSEEGIAAKTWLELPRRIARGEAQALTDWPVPRAIAAMQRLVHDLMRIAHGAPPSYFPR
DALPKLPAVRAALDQWARTLQQAARHAEHPLNAGLLMESLVAQGQQAMRPARS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccgcagccgtgagcgacgataccggcgacatcaccgccctggcccgggacggt
cagttgccgctcccttggctggcgggcccgcttcagcaggcgctgacccagggccgcagc
catgcgctgctgctgcaggggccggctggcgtgggtcagttcgacctggcgctgctgctg
gcgcaggcctggctctgcgaacaacgcaccgccccggatcagcccggctgtggtcgctgc
gccagttgccatctgctccggtcccgttcccatccggacttcatggtggtgctgccggaa
gccctgcgcgagccgctgggctttggcgcgatggaggctgaaggcagcgagcccaaggcc
agcaagaccaagcccagccgcgagatcaagatcgagtccatccggcaggtgctgtcattt
gcccaggtcagtgcggcccggggcaaggccaaggtggtggtggtctaccccgccgaggcg
ctcaatacggtggcggccaatgcactgctcaaaacgctggaggagccgcagggcctgctg
cgctttgtgctggccagtgccgcaccgcagcaattgctgcccaccatccgcagccggtgc
cagcccctgcaaatggccttgccggcgcgggatgcagcggtgtcgtggctgagcgggcag
ggcgtggcgtctgcggacgtgctgctggacgccaccgggggccgcccccaggaggcgctg
ctgtggagcgaggagggcattgccgccaagacctggctggagctgccccgccggatcgcc
cgcggcgaggcgcaggcgctgaccgattggccggtgccccgtgccatcgccgccatgcag
cggctggtgcacgacctgatgcggattgcccacggcgcgccccccagctacttcccccgg
gacgcgctgcccaagctgccggcggtgcgcgccgccctggaccagtgggcccggacgctg
cagcaggctgcccggcatgcggagcatccgctcaatgcgggcctcctgatggaatcgctg
gtggcccagggtcagcaggcgatgcggccggcgcggtcctga
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