Roseateles depolymerans: RD2015_3204
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Entry
RD2015_3204 CDS
T04166
Name
(GenBank) ABC-type dipeptide transport system, periplasmic component
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rdp
Roseateles depolymerans
Pathway
rdp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD2015_3204
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rdp02000
]
RD2015_3204
Transporters [BR:
rdp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RD2015_3204
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ALV07664
UniProt:
A0A0U3NGW9
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Position
3762103..3763803
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AA seq
566 aa
AA seq
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MNHCPSTLVAPVAARAPLSAPRHDPSRRRPPLNALRSALRALAVTLGCAGGMSLVALPVQ
AQTLRWAGAGDMQTADPHSQNEIVTNAMNGQVYERLVARDRNLNIVPSLATEWTQVKPTL
WRVKLRQGVKFQDGTPFTADDVVFSVTRAKDVNSNISAYAQAVGTPRKVDDSTVEFQLEQ
VNPIFLQHLDLIFIMSKRWSEQHKVTRPQNYKDKDETYAATHSNGTGPYIMVDRQPGIRT
SFKRNPNWWGKFEGNVQEAVFTPIANDSTRLAALVSGEVDVVLDPAPRDLNKLKQTSGVK
VLEGPENRLIFIGMDQARDKLLYGKVPGDKNPFKDARVRQALYQAIDINAIKLKLMNGLS
LPTGGLTPSPLGAYNDAQIEARLPYDVAAAKKLMADAGYANGFEVTLDCTNNRYINDEKI
CLALASMWAQLKVKVNVNAQPRTLMFPKLEKMDTSLYMFGWGGVITDAEVALTPLLRNRG
EKGVGYYNFGNWKNDKFDALAASSSVEPDPKKREELVKSALREFKAQNHVIPLHRQMIPW
AFRQNVTVQHRADNWFELRWVTVGGK
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaatcactgcccttcgaccctggtggccccggtggctgcccgcgccccattgtccgcg
ccccgccatgacccgtctcgccgccgtccgccgctgaacgccctgcgatcagcgctgcgc
gctctggccgtgacgctgggctgtgcaggggggatgagcctggtcgccctgcccgtccaa
gcgcaaaccctgcgctgggccggcgcgggcgacatgcagaccgctgacccgcattcccag
aacgagatcgtcaccaatgccatgaacgggcaggtgtatgagcggctggtggcccgggac
cgcaacctcaacatcgtgcccagcctggccaccgagtggacccaggtcaagcccacgctc
tggcgggtgaagctgcgccagggcgtgaagttccaggacggcacgcccttcaccgcggac
gacgtggtgttctcggtgacgcgcgccaaggatgtgaactccaacatcagcgcctatgcc
caggcggtcggcacgccgcgcaaggtggacgacagcacggtggagttccagctggagcag
gtcaaccccatcttcctgcagcacctggacctgatcttcatcatgagcaagcgctggagc
gagcagcacaaggtcacccgtccgcagaattacaaggacaaggacgaaacctacgccgcc
acccacagcaatggcaccggcccctacatcatggtggaccggcagcccggcatccgcacc
agcttcaagcgcaatcccaactggtggggcaagttcgaaggcaatgtgcaggaggccgtg
ttcacgccgatcgccaacgactcgacgcggctggcggccctggtctccggcgaggtggac
gtggtgctggacccggccccgcgtgacctgaacaagctgaagcagaccagcggtgtgaag
gtgctggaaggcccggagaaccggctgatcttcatcggcatggaccaggcgcgggacaag
ctgctttacggcaaggtgccgggcgacaagaacccgttcaaggacgcccgcgtgcggcag
gcgctctaccaggcgattgacatcaacgccatcaagctcaagctgatgaacggcctgagc
ctgcccaccggcggcctgacgccctccccgctcggcgcctacaacgacgcccagatcgag
gcccgcctgccctacgacgtggccgcggccaagaaactgatggccgatgcaggctatgcc
aatggttttgaggtgacgctggactgcaccaacaaccgctacatcaacgacgagaagatc
tgcctggcgcttgcctccatgtgggcacaactgaaggtgaaggtcaacgtgaatgcccag
ccgcgcacgctgatgttccccaagctggagaagatggacaccagcctctacatgttcggc
tggggcggcgtgatcaccgatgcggaagtggctttgacgccgctgctgcgcaatcgcggt
gaaaagggcgtgggctactacaacttcggcaactggaagaacgacaagttcgacgccctg
gccgccagctcgagcgtggagcctgacccgaagaagcgggaagaactggtgaagtccgcg
ctgcgggagttcaaggcgcagaaccatgtgattccgctgcaccgccagatgattccctgg
gccttccgccagaacgtgacggtgcagcatcgggccgataactggtttgagctgcgctgg
gtgacggtgggcgggaagtaa
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