Roseateles depolymerans: RD2015_3322
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Entry
RD2015_3322 CDS
T04166
Name
(GenBank) hypothetical protein
KO
K02014
iron complex outermembrane recepter protein
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rdp02000
]
RD2015_3322
Transporters [BR:
rdp02000
]
Other transporters
Pores ion channels [TC:
1
]
RD2015_3322
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Porin_OmpG
Motif
Other DBs
NCBI-ProteinID:
ALV07780
UniProt:
A0A0U3N0S2
LinkDB
All DBs
Position
complement(3880480..3883161)
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AA seq
893 aa
AA seq
DB search
MFKRKSVNLAALLALGIALPAVAQQQLDKVEITGSSIKRIDAETALPVSVITRDNIDKSG
VSNVQELVDRLSYNNGGGISLGQSIGDSSATGQTGASLRGLGRSRTLVLLNGRRLPIYPF
SGQGVDLNSVPLAAIERIEVLRDGASATYGSDAIGGVINFITRKDWQGGEISASMEIPHG
VGDVASFAGGFGVGDLSKQKFNILGTFNYQKYDPIRAKDRGFASTGNRPDLGIVKDSGNT
FPANASIPNAAGNIYVPGAANYPLCNAPDSFKGSANCRYDYTHYIDLIPEQERYGALLKG
TLAADDNNTLFAELAYSRNEITLGSSQTPSTTTGKPAYRYPGGGKWYPTAAVDAVQPGYR
GDLIINWRIVDGGQRRDKVTNEVLRTVVGAEGTLGGFDYKTAFTYAEGKARDDFVSGIYS
DTRLVSALKTGLINPFGPNDAAGLAALKSAELSGNNRKSKTSNTGVDFTLSRELFNIGAG
NVGAAVGAEFRKEKYNDGYSDIAGSGDIVGGSGNAGKVTGQRDISGVFGEFNFPLLKTLE
LNAAVRYDRYSGTKGESRDGSFSSPSVSATSPKVALRFTPMPGLLLRASYGKGFRAPALD
NMYAPSAGTNTGSNYTDPFYDALVGCAKSPNTDHCDTQLTAVNNSNPNLKPEKSKSFNLG
LVFEMIKDTTMEVNYFDIKITNGIRALTGDDILKDWFAKKTGPTTSSSVYANRLVIDPAT
GYLNYVNASQENVGQARVAGFDLNAKTRVRSEWGTFTPGWEGTVLTKSTETNIVTNEEVD
NLGKYAVGGPVIKFKQTFTLDWDKGNWGLGLRYYRQNSYTDYGDERTVKAYDLVDFQALY
RGIKNMTFTVGLRNLFDKKPPVTVQEDYFQVGFDPTYADVKGRTFYLRGKYAF
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaacgcaagagcgtcaatcttgccgccctgctggccctgggcatcgcgctgccc
gcggtcgcccaacagcagctcgacaaggtcgaaatcacgggttcgtcgatcaagcggatc
gatgctgaaaccgcgctgccggtcagcgtcatcacccgggacaacatcgacaagagcggt
gtgtccaacgtccaggagctggtggaccgcctgagctacaacaacggcggcggcatctcg
ctgggccagtccatcggcgactcctcggccaccggtcagaccggcgcctcgctgcgcggt
ctgggtcgctcgcgcaccctggtgctgctcaacggccgtcgtctgccgatctacccgttc
agcggccagggcgtggacctgaactcggtgcccctggcggccatcgagcgcatcgaagtg
ctgcgtgacggcgcttcggccacctacggctccgacgccatcggcggcgtgatcaacttc
atcacccgcaaggactggcaaggcggcgaaatcagcgccagcatggaaatcccgcacggc
gtgggcgacgtggcatccttcgcaggcggcttcggcgtgggcgacctgtccaagcagaag
ttcaacatcctgggcaccttcaactaccagaagtacgacccgatccgcgccaaggaccgt
ggcttcgccagcaccggcaatcggccggacctgggcatcgtgaaggactcgggcaacacc
ttcccggccaacgcgtcgatccccaatgccgccggcaacatctatgtgccgggcgccgcc
aactatccgctgtgcaatgcaccggacagcttcaagggttcggccaactgccggtatgac
tacacccactacatcgacctgatccccgagcaagagcgttatggcgcgctgctcaagggc
accctggccgccgacgacaacaacacgctgttcgccgaactggcctacagccgcaacgaa
atcaccctgggctcgtcgcagacgccctcgaccaccaccggcaagcccgcctaccgttat
ccgggcggcggcaagtggtacccgaccgccgccgtggacgcggtgcagccgggctatcgc
ggcgacctgatcatcaactggcgtatcgtggacggcggtcagcgccgtgacaaggtcacc
aacgaagtgctgcgcaccgtggtgggcgccgaaggcacgctgggcggcttcgactacaag
accgctttcacctatgctgaaggcaaggcgcgtgacgacttcgtcagcggcatctattcg
gacacccgcctggtcagcgccctcaagacgggcctgatcaacccgttcggccccaacgac
gcggccggcctggcggcgctgaagtcggctgaactgtcgggcaacaaccgcaagtccaag
accagcaacaccggcgtggacttcacgctgtcgcgcgagctgttcaacattggcgctggc
aacgtgggtgctgcggtcggtgctgaattccgcaaggaaaagtacaacgacggctactcg
gacatcgcaggctccggcgacatcgtcggcggctccggcaatgccggcaaggtcaccggc
caacgggacatcagcggcgtcttcggcgaattcaacttcccgctgctcaagaccctggag
ctgaacgctgcggtgcgttatgaccgctacagcggcaccaagggcgagtcgcgcgacggt
tccttcagctcgccgtcggtctcggccacgagcccgaaggtggccctgcgcttcaccccg
atgcccggtctgctgctgcgcgcgtcctacggcaagggcttccgtgccccggccctggac
aacatgtacgcaccgtccgccggcaccaacaccggcagcaactacaccgacccgttctat
gacgcgctggtgggctgcgccaagtcgccgaacacggaccactgcgacacgcagctgacc
gccgtgaacaacagcaaccccaacctgaagcccgagaaatcgaagtccttcaacctgggt
ctggtgttcgagatgatcaaggacaccacgatggaggtgaactactttgacatcaagatc
acgaacggcatccgcgcgctgaccggtgacgacatcctgaaggactggttcgccaagaag
acaggcccgaccaccagcagctcggtgtacgccaaccgcctggtcatcgacccggccacc
ggctacctgaactacgtgaatgcctcccaggaaaacgtgggccaggcccgtgtcgccggc
ttcgacctgaacgccaagacccgcgtgcgctctgagtggggtaccttcacgccgggttgg
gaaggcaccgtgctgaccaagagcaccgaaaccaacatcgtgaccaacgaggaagtggac
aacctcggcaagtacgcggtgggtggcccggtgatcaagttcaagcagaccttcacgctg
gactgggacaagggcaactggggcctgggcctgcgctactaccgccagaactcctacacg
gactatggtgatgagcgcaccgtcaaggcctacgacctggtcgacttccaggcgctgtac
cgcggcatcaagaacatgacgttcaccgtgggtctgcgcaacctgttcgacaagaagccc
ccggtcaccgtgcaggaagactacttccaggtcggtttcgacccgacctacgccgatgtg
aagggtcgcaccttctatctgcgtggcaagtacgccttctaa
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