Roseateles depolymerans: RD2015_3464
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Entry
RD2015_3464 CDS
T04166
Name
(GenBank) ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rdp03019
]
RD2015_3464
03009 Ribosome biogenesis [BR:
rdp03009
]
RD2015_3464
Messenger RNA biogenesis [BR:
rdp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RD2015_3464
Ribosome biogenesis [BR:
rdp03009
]
Prokaryotic type
rRNA processing factors
RD2015_3464
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ALV07921
UniProt:
A0A0U2U7D1
LinkDB
All DBs
Position
complement(4047309..4048793)
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AA seq
494 aa
AA seq
DB search
MEDILINWSPQETRVAVVENGAVQELHIERTLERGLVGNVYLGKVARVLPGMQSAFIDIG
LERAAFLHVADLHLNGATPRHHHGDGSHPVPIERQVYEGQALTVQVIKDPIGTKGARLST
QISIAGRLLVHLPQDNHIGISQKIGSPEARDALRSRMQTLASVGVQDGNTGGFILRTNAE
EASDEELAADIAYLRKTWGSIREKSLREPPGTLLFQDLSLVERVLRDLASERTQSIRIDS
KLQYDVLRGFGETYMPAATAKLDLYRGERPIFDLHNIDAEVARALARRVDLKSGGYLIID
QTEAMTTIDVNTGGFVGARNFDDTIFKTNLEAAGAIARQLRLRNLGGIIIVDFIDMTREE
HKTAVLHEFRKQLSRDRTKVTVGGFTQLGLVELTRKRTRESLSRMLCEPCPTCEARGQVK
TARSICYEIMREILRESRQFNPKEFRVVAAANVVEMLLDEESQHLAGLSDFIGKPISLTA
EPTNQTEHYDIVLM
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatcctgatcaactggtccccgcaggagacgcgggtggcggtggtcgaaaac
ggggcggtgcaggagctgcacatcgagcgaacgctcgagcgaggcctggtgggcaatgtg
tacctgggcaaggtggcccgggtgctgccgggcatgcagtccgccttcatcgacatcggg
ctggagcgggccgccttcctgcatgtggccgacctgcatctgaacggcgccacgccgcgt
catcatcatggggacggatcgcatccggtgcccatcgagcggcaggtgtatgaaggccag
gccttgacggtgcaggtcatcaaggacccgatcggcaccaagggggcgcggctgtccacg
cagatctcgatcgcgggccgcttgctggtgcatctgccgcaggacaaccacatcggcatt
tcgcagaagatcggttctccggaagcgcgcgatgcgctgcgcagccgcatgcagaccctg
gcgtcagtgggcgtgcaggacggcaacacgggcggcttcattttgcgcaccaatgccgag
gaagccagcgacgaggaactcgcggccgacatcgcctacttgcgcaagacctggggctcg
atccgggaaaagagcctgcgcgagccgccgggcaccttgctgttccaggacctgagcctg
gtggagcgggtgctgcgggacctggccagcgagcggacccagtcgatccgcatcgactcc
aagctgcaatacgacgtgctgcgcggctttggcgagacctacatgccggcggccacggcc
aagctggacctgtaccggggcgagcggccgatctttgatctgcacaacatcgatgccgag
gtggcgcgggcgctggcgcggcgggtggacttgaagtcgggcggttacctgatcatcgac
cagaccgaggcgatgaccacgatcgatgtgaacaccggcggattcgtgggtgcgcgcaat
ttcgacgacacgattttcaagaccaatctggaagctgccggggcgattgcgcggcagctg
cggctgcgcaacctgggcggcatcatcattgttgacttcatcgacatgacgcgggaagag
cacaaaaccgccgtgctgcatgagttccgcaagcagctcagtcgcgaccgcaccaaggtg
acggtgggcggcttcacgcaactcgggctggtggaactgacgcgcaagcgcacgcgggag
agtctgtcccgcatgctgtgcgagccgtgcccgacttgcgaggcgcggggccaggtcaag
acagcccgcagcatctgctacgagatcatgcgggagatcctgcgtgagtcgcggcagttc
aatccgaaggaattccgggtcgtggcggcggccaatgtggtggagatgctgctggatgag
gaaagccagcatctggccgggctgtcggacttcatcggcaagccgatttccttgacggcc
gagccgacgaatcagacggagcattacgacatcgtgctgatgtga
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