Roseateles depolymerans: RD2015_3629
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Entry
RD2015_3629 CDS
T04166
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RD2015_3629
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rdp03019
]
RD2015_3629
Enzymes [BR:
rdp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RD2015_3629
Messenger RNA biogenesis [BR:
rdp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RD2015_3629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
DUF2204
Motif
Other DBs
NCBI-ProteinID:
ALV08084
UniProt:
A0A0U3N1N3
LinkDB
All DBs
Position
complement(4228751..4230466)
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AA seq
571 aa
AA seq
DB search
MIKKLINKLLGKPEGSASKATPLGKRVEITAEEHRIDPDLLDERGVKVVKGLTDAGFEAY
IVGGAVRDLLLGRRPKDFDVATDATPEEVKNQFRRAFIIGRRFRIVHVVFGRGREHEVIE
VSTFRALLTQDDAEQVQGNEKTSKDALAGKSHVVDASGRVLRDNVWGPQVEDAARRDFTV
NAMYYDPQRQLVVDYHGGLADSRKKILRMIGDPETRYREDPVRILRAVRFAAKLGFTIEP
KTRAPIQSMSALLANVPLSRMFDEMIKLLQTGHALASLEELRKQGLARGIFPILDAVLDD
NGALPDNVHGRFVRLALEDTDKRVAEGRSVAPSFMLACMLWGEVQQRWTRLIAGGEGPVP
ALQQAIDLVFDARVGDISGRGKLAADMREIWMMQPRFERRTGSGPHRLIEQPRYRAGFDF
LALRAEAGEIDATLADWWEDFALGNEDERRALLDQARESQRQTSPKSRGKQGGGRVHQVA
RGAVSDAAGEPAARSAGGAGRGAAADSRGQGDADRDDDDLDDRDPAADFGAEGDSTRANP
ARKRRRRRKPKAAGGSAGGEAGGAGSAGGEG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaactgatcaacaagttgctgggcaagcctgagggcagcgcctcgaaggcg
acgccgctgggcaaacgcgtcgagatcaccgcggaagaacaccgcatcgaccccgacctg
ctggatgaacggggggtgaaggtcgtcaagggcctgaccgacgcgggcttcgaggcctac
atcgtcggcggcgccgtgcgcgacctgctgctgggccgtcgccccaaggacttcgacgtg
gccaccgatgccaccccggaagaggtcaagaaccagttccgccgggccttcatcatcggc
cgccgcttccgcatcgtgcacgtggtgttcggtcggggccgcgagcatgaggtgatcgag
gtctccaccttccgcgcgctgctgacgcaggacgacgccgagcaggtgcagggcaacgaa
aagacgtccaaggacgcactggccggcaagtcccatgtggtggacgccagcggccgggtg
ctgcgggacaacgtctggggcccgcaggtggaagatgcggcccgtcgcgacttcaccgtc
aacgccatgtattacgacccgcagcgccagctggtggtcgactaccacgggggcctggcc
gacagccgcaagaagatcctgcgcatgatcggcgacccggagacgcgctaccgcgaagac
ccggtccgcatcctgcgtgccgtgcgctttgccgccaagctgggcttcaccatcgagccc
aagacccgtgcgcccatccagtcgatgtccgccttgctggccaatgtgccgctttcgcgg
atgttcgatgaaatgatcaagttgctgcagaccggccacgccctggccagtctggaggag
ctgcgcaagcagggtctggcgcggggcatcttccccatcctggacgcggtgctggacgac
aacggcgcgttgccggacaacgtgcatggccgctttgtccgcctggccctggaagacacc
gacaagcgggtggctgaaggccgctcggtggcccccagcttcatgctggcctgcatgctg
tggggcgaggtgcagcagcgctggacccgcctgatcgcgggcggcgaaggtccggtgccg
gcgctgcagcaggccatcgacctggtgtttgatgcccgcgtgggcgacatctccggtcgc
ggcaagctggcggcggacatgcgcgagatctggatgatgcagccgcgcttcgagcgccgc
accggcagcggtccgcaccgcctgatcgagcagccgcgctaccgcgctggcttcgacttc
ctggccctgcgggccgaggcgggcgagatcgacgccacgctggccgactggtgggaagac
tttgcgctgggcaacgaggacgaacgtcgtgccttgctggaccaggcgcgtgaatcgcag
cgccagacctcgcccaagagccgcggcaagcaaggcggcggccgggtgcaccaggtggcg
cgcggcgccgtgagtgatgcggccggggaaccggcagctcgctccgccggtggagccggc
cgtggggcagccgccgattctcgcgggcaaggcgatgccgatcgcgatgacgacgacctg
gacgaccgcgaccccgctgccgacttcggcgccgaaggggacagcacgcgcgcgaatccg
gcgcgcaagcgtcgccgccgtcgcaagcccaaggctgcgggcgggagtgccggcggtgaa
gcgggcggcgcgggcagtgctggcggagagggctga
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