Roseateles depolymerans: RD2015_3659
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Entry
RD2015_3659 CDS
T04166
Name
(GenBank) Glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp00500
Starch and sucrose metabolism
rdp01100
Metabolic pathways
rdp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RD2015_3659
Enzymes [BR:
rdp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RD2015_3659
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
DUF3459
GlgB_N
Motif
Other DBs
NCBI-ProteinID:
ALV08114
UniProt:
A0A0U3LNU6
LinkDB
All DBs
Position
complement(4263123..4265258)
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AA seq
711 aa
AA seq
DB search
MTMMAKTLPLQPGRHEPLGAHVRDGGVNFAVFSAHAWRVEVCLYDEAGQRELARYPLQGP
VDGIWSGFLPGAKAGLVYGLRAHGPHAPQEGHRFNASKLLLDPYAREIVGQFSWQAEHHG
YPLGHPDGPLILDARDNGAIALKARVAPPRADQPGGMVDPRAHAPRHPPASVVLYEVHVK
GFTMRHPDIPPALRGSYAGLAHPAAIAHFKRLGVTTLSLLPVQYTIDEPHLAHTGLRNYW
GYNTLGFFCPDPRLASAAARHDPTAVTQEFRAMVQALHAAGLEVVLDVVYNHTPEGNEWG
PTLSLRGLDQKSYYRLQADDPSKLENLTACGNTVRVQHPRVTQLVLDSLRYWVGEMGVDG
FRFDLAPVLGRTDCGHDPHAAFYTALRQDPLLSQVHLIAEPWDAGPQGYQLGNFPGRFME
WNDKFRDGVRGYWLGRGPDGGPVDRGALARRFTASSDVFQQGQRSPLASINFLAVHDGYT
LADLVSYSRKHNEANGEDNRDGRDGELCHNFGAEGPTDDPQIRETRRRVQRALLATLLLS
QGTPMLYAGDEIGNSQGGNNNAYCQDNEIGWLDWDRADQSLATFVGDVLRCRREHPLLRH
GRWFSSVGDDAVSLRWFHPSGRDMRQEDWHDGGQQTLTVRLSDGTEDLLLLFNPSPCDQA
FQLPPPTMGRSRQAWTVLLDSSGVTPTGRVETLALSVPSRSLLLLTAPAPA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgatggccaagacgcttcccctccagcccggacggcatgagccgctgggcgcc
catgtccgcgatggcggcgtgaatttcgccgtcttctccgcgcacgcctggcgggtggaa
gtctgcctctatgacgaggcgggtcagcgcgagctggcccggtatccgctgcaggggccg
gtggacggcatctggtcggggttcctgcctggcgcgaaggcggggctggtctacggtctg
cgcgcccacgggccgcatgcgccgcaggaaggccatcgcttcaacgccagcaagctgctg
ctggacccgtatgcgcgcgagatcgtcggtcagttcagttggcaggcggagcatcacggc
tatccgctgggccatccggacggacccctgatcctggatgcgcgggacaacggtgcgatc
gcactgaaggcccgtgtcgcgccgccgcgtgctgaccagccgggtggcatggtcgatccg
cgggcccatgcgccgcgtcatccgcctgcttcggtggtgctctacgaggtgcatgtgaag
ggcttcaccatgcgccatccggacatcccgccggcgctgcgcggcagttatgcgggcctg
gcgcatccggccgccatcgctcacttcaagcgcctgggcgtgaccacgctgtcgctgctg
ccagtgcaatacaccatcgacgaaccccatctggcccacaccggcctgcgcaactactgg
ggctacaacaccctgggcttcttctgcccggacccgcgcctggccagcgcggccgcacgg
cacgacccgaccgccgtgacgcaggaattccgcgccatggtgcaggccctgcacgccgcc
gggctggaggtggtgctggacgtggtctacaaccacacgcccgaaggcaacgaatggggc
ccgacgctgtccctgcgcggcctggaccagaagagctactaccgcctgcaggccgacgac
ccgtccaagctggaaaacctcaccgcctgcggcaacaccgtgcgggtgcagcatccacgc
gtcacgcaactggtgctggactcgctgcgctattgggtgggcgagatgggcgtggacggt
ttccgttttgacctggccccggtgctgggccgcaccgactgcggccatgacccccacgcg
gcgttctacaccgccttgcggcaggacccgctgctgtcgcaggtgcacctgatcgccgag
ccctgggacgccggcccgcagggctatcaactggggaacttcccgggccgcttcatggaa
tggaacgacaagttccgcgacggcgtgcggggctactggctgggccgtgggccggacggc
gggccggtggaccgcggtgcgctggcgcgacgtttcaccgcctcgagcgacgtgttccag
caggggcagcggtcgccgctggcctcgatcaatttcctggcggtccacgacggctatacg
ctggccgacctggtgagttattcccgcaagcacaacgaagccaacggcgaggacaaccgc
gacggtcgcgatggggagctctgccacaacttcggcgccgaagggccgacggacgaccca
cagatccgcgagacccgccgccgcgtgcagcgtgcgctgctggccacgctgctgctgtcg
cagggcacgcccatgctgtatgcgggcgatgagatcggcaacagccagggcggcaacaac
aacgcctattgccaggacaatgagatcggctggctggactgggaccgcgcggaccagtcg
ctggcgacctttgtgggcgacgtactgcgctgccgccgtgaacatccgctgctgcgtcac
ggacgctggttcagcagcgtgggtgacgatgcggtgagcctgcgctggttccatccctcc
gggcgcgacatgcggcaggaggactggcatgacggcggccagcagaccctgacggtgcgc
ctgagcgacggcacggaggacctgctgctgctgttcaacccttcgccttgcgaccaggcc
ttccagttgcccccgcccaccatgggccgcagccggcaggcctggacggtgctgctggac
agcagcggcgtgacgccgaccggccgcgtggaaacgctggccttgtccgttccgtcccgc
tcgctcctgctgctgacggcacccgcgcccgcttga
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