Roseateles depolymerans: RD2015_3660
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Entry
RD2015_3660 CDS
T04166
Name
(GenBank) glycogen branching protein
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp00500
Starch and sucrose metabolism
rdp01100
Metabolic pathways
rdp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RD2015_3660
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rdp04147
]
RD2015_3660
Enzymes [BR:
rdp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
RD2015_3660
Exosome [BR:
rdp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RD2015_3660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase_C
Alpha-amylase
GlgB_N
AMPK1_CBM
Motif
Other DBs
NCBI-ProteinID:
ALV08115
UniProt:
A0A0U3MYN1
LinkDB
All DBs
Position
complement(4265258..4267267)
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AA seq
669 aa
AA seq
DB search
MSVDVPLIDLLPEEDLRLLAAGEHLRPWLWLGAHPLQVDGVEGVRFAVWAPSAQRVSVVG
SFNDWDAQRHPMRLRAQSGIWEVFVPQAAVGDFYKFALTDAQGQPLPLKADPYAFRGELR
PSNASIVSGLPPPVALPPGRAEANRRDAPLSIYELHPTSWRREGEAFPDWDLLARELPPY
AAALGFTHVELLPVTEYPFDPSWGYQTLGLHAPTARLGPPEGLQRFVSACHAAGLGVLLD
FVPAHFPEDPHGLARFDGTALYEYADPREGWHHDWHTLIYDFGKPQVRQFLCGAALFWAE
RHGVDGLRVDAVASMLYRDYSRPAGEWIPNIHGGRENLEAVALLRHMNEVLGREAPGFIT
IAEESTAFPLVSAPTSSGGLGFHYKWNLGWMNDTLHYMRELPLFRQWHHDKITFGLVYAF
NENFVLPLSHDEVVHAKGSLISKMPADDRPVEDMPPAVQATPHRWTPPGDWQRFAGLRAY
YGFMWGHPGKKLLFMGQEFAQTQEWDFQSALPWALLEHPAHAGVQQLVEALNAIYRRWPA
LHRQEAEPTGFEWLQDQDREQSVFGFARRCQGEATVVVVSNFTPVAREDYRLPMPAGAAG
EGTWTVLLDTDAEAFDGTAWLSGRDAPRAEDGALVLQLPPMSTLFLVGGDPVHSPAADTA
PADANAPTA
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttgatgtgccgctgatcgatctgctgccggaggaggacctgcgcctgctggcc
gcgggggagcacctgcggccctggttgtggctgggcgcgcatccgctgcaggtggacggt
gtcgagggcgtgcgttttgccgtctgggccccatcggcgcagcgggtcagcgtggtgggc
agcttcaatgactgggatgcccagcggcatccaatgcggctgcgcgcgcagtccggcatc
tgggaagtgttcgtgccgcaggctgcggtgggcgacttctacaagttcgcactgaccgac
gcgcagggccagccgctgccgctcaaggcggacccctatgccttccgcggcgagctgcgg
cccagcaatgccagcatcgtttcgggtctgccgccgccggtggcccttccgccagggcgg
gccgaggccaaccggcgcgatgcgccactgtccatctacgagctgcatcccacctcctgg
cgacgcgagggcgaggcgttcccggactgggacctgctggcccgtgaactgccgccgtat
gccgcggcgctgggtttcacccatgtggagctgctgccggtcactgaatatccgtttgat
ccgtcctggggctaccagaccctgggcctgcatgcgcccacggccaggctggggcccccg
gaaggtctccagcgtttcgtgtcggcctgtcatgccgcgggcctgggcgtgctgctggac
ttcgtgccggcgcacttcccagaagatccgcacggcctggcccgcttcgacggcacggcc
ctgtacgaatacgccgatccgcgcgaaggctggcaccacgactggcacacgctcatctac
gacttcggcaagccgcaggtgcggcagttcctctgcggtgccgcgctgttttgggcggag
cgtcatggcgtggacgggcttcgtgtcgatgccgtggcctccatgctctaccgcgactat
tcccgtccggccggcgagtggatacccaatatccatggaggacgcgagaacctcgaggcc
gtggcgctgctgcgccacatgaacgaggtgctgggccgggaagcgcccgggttcatcacc
atcgcggaagagtcgaccgcttttccgctggtgtccgcgccgacctcctcgggcgggctg
ggctttcactacaagtggaacctcggctggatgaacgacacgctgcactacatgcgcgag
cttccgctgttccgccagtggcatcacgacaagatcaccttcggcctggtctatgccttc
aacgagaacttcgtgttgccgctctcgcacgatgaggtggtgcatgccaagggttcgctg
atcagcaagatgccagcggacgaccgaccggtcgaggacatgccgcccgcggtccaggcc
acgccccaccgctggacgccgcccggcgactggcagcgcttcgccggcctgcgggcgtac
tacggcttcatgtggggccaccccggcaagaagctgctgttcatggggcaggagttcgcc
cagacgcaggaatgggatttccagtcagcgctgccctgggccctgctggaacatccggca
catgccggtgtgcagcaactggtggaagcgctcaacgcgatctaccgccgctggccggcg
ctgcatcggcaggaggcggagcccacggggtttgaatggctgcaggaccaggaccgggag
cagtcggtgttcggcttcgcccggcgctgccagggcgaggccacggtggtggtggtcagc
aatttcacgccggtggcgcgggaggactaccgcctgccgatgcccgccggcgcagcgggt
gagggcacctggaccgtgctgctggacacggacgcggaggcgttcgacggcaccgcgtgg
ctgagcggtcgcgacgctccccgtgctgaagatggcgccctggtgctgcagctgcccccc
atgtccacgctgttcctggtgggcggcgacccggtccactccccagcggcagacacggcc
cctgccgatgccaacgcccccactgcctga
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