Roseateles depolymerans: RD2015_3825
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Entry
RD2015_3825 CDS
T04166
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
rdp
Roseateles depolymerans
Pathway
rdp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD2015_3825
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
DUF4573
Calx-beta
Motif
Other DBs
NCBI-ProteinID:
ALV08276
UniProt:
A0A0U3N273
LinkDB
All DBs
Position
4455799..4461474
Genome browser
AA seq
1891 aa
AA seq
DB search
MNSSTHPQKSAAWPHAVEPMNELAPGTRAAATPGMAQASVPGAVKAGAGRTGLRRATSAD
DDRTEEGLTPQDDRPAEEAAASSSEPVISDAGLSGLQEPGGALTEIAEEEEEDKAGLLLF
GSGGMAAALGLGVLAPLVLAGGAGHGSGGPQPPVTGPTGAGHSVDDQAGAGAGSGSGSGS
GSGSGSGSGSGSGSGSTGTGTGTGTGSGSGSGSGTGDNGSTVNPDVSQEAGHDASGDPGA
PSAPNPENPVTPVDPIDSVGPVDPTGPTDPAAPVDPSLPTDPIVPVDPVIPIDPVVPVDP
TNPVDTVEPVDPIDPIDPVDPVDPVDPTDPIDPVDPIDPVDPVDPVDPVDPTAPVDGTDP
VDEFPPPRPQPPSLSTTAPTLTLLRDTGASSTDRITADGTLRIQALDPDRPWEFSLDGGT
VWELGTGHQIPAATFLGPGAHTVLVRHTDGTAATSDVASLSFELDTQADAPLLALAEDTG
VSATDRITHNGQIQVTALEPGAVWEFSLDGGATWTAGQGDTLDLAAVSGAGDHEVQIRQT
DLAGNVSNAVHIDLTLLLDAPALDLQTDAGLQLQTSRVLGIASALQGVPLVDTLAELSQT
DLRTLSLRIDSGLAPDDCLRFDDGPVLDQDLHATHATLAGVTGLTYHFDAQLGLLTLQKT
DGSALTGMEASTLANALRLVSLAALPTPGDRSFSFWGEDLAGNVGDPSTVRITVDIRSPM
LDLNGALAGVEPLTHVHSLEGPVRLFASDLTLTHDNPEARYSQVTLRGFGGGTSFEDQLA
SQTGPSLVTLTDGLQWQLGDTVWTVSRISTRYAFSTADGSLASQEAVTALLESLRLMNPL
TEPGQGERRFTVVLTDHVGNTGVASGSVILDQTAPVADLNGLAVGQDHGMQVVAGVGWML
PLFNPATAALLDDSPITVLTLSFSSALSNVFQGQAGQQERIGLSDGDDTDGLGHALVLGQ
GGTVVDDQSVPGRIITLTLSGDASRPVLTLTADAPLTPEQVSQLLQRLRYEGEAGAALGV
REIAVTATDVAGNTTTTPSLAQLEVLPVGTPLVFLHPDTDSGTYNSDNITRMDGSADSPL
RLRGAGRAGATLHIYLDANGNGTGTADERVGTVVCDAQGRWELALPARPLADGQYPFIAV
DPDAGLVSPTLTVTVDTRPPASAYDMGDSVALSPRLFGVSDAFERVVVEIDTDNNLLNGY
ELRYETRADAAGQWLLDTRVDRPVAGTFQPFMNGQTVQTRVTTFDMAGNATVREDAAPAI
ASVFNLSDAHVVEGVDGTRELVFMVTRSGDLSSDGSVQWSVDLLRSSATDNPAGLLSDTD
FTGAASGQVRFAAGETQQLVRFTVSGDYYREVNERLMVNLEHAQGGTIGDGLGIGTIYEV
DIDHTQAAYSMRNLNPNLNTAAIRVRRSSDNQEQDIGFDANGNLDTVALLNFVGRSSGDT
GYVTTWYDQSGHGRDMVQANASMQGVVVDGGVLVTRADGSAGISFNSRNGASDDFMTTNG
VAGTDWTSALIYAKVQSEGGQNGSLFNLGPSGYGRLSAHYPSNASDGGGYVFDVSEWDRA
GPGRLNRELTSGHQSLIGLANDVVFEAHSGNTTAGSAELNYTNAAQAIFENGIRVTSDAS
MFDRFSTTNQWFLARHGVGSEYYQRVIFNEFMVYLDTGNSAPNMRSLLGTANDDVLTYSG
ERQLQRIDGMAGNDTLYLSGATDLDFGQFSGGVRGMSQVWMDNGQANTLTLTTATLTANG
NVPLTVVMGQGDSVVLNGQRLNYDAQQAQSLVIGLDGDEVLFSTSRNDVLRGGAGADTFT
WRANQGGVDTVVDFSDAQGDRLDLSQLLQRMTAGREELYLNKQIDANGQVVVRVDTDGRG
HFQDADLIIQLGAAHPIDPITVVTHYGTVVL
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgagcacccacccccaaaagtcggccgcttggccgcacgctgttgaaccgatg
aatgagcttgcgccgggcacccgtgcggcagcgacgccggggatggcgcaggcgtccgtg
ccgggtgcggtgaaggcaggtgccggacgcaccggtctccgtcgagcaaccagcgcggac
gacgatcggaccgaggagggcctgacccctcaggacgatcggccagcggaagaggcggcg
gcatcgtcgtccgagccggttatcagcgatgcgggcctgtcgggcttgcaggaaccgggc
ggggccttgaccgagatcgccgaagaggaagaggaggacaaggccggcctcctgctgttc
ggatccggcggcatggcggcggcgcttgggctgggtgtgcttgctccgctcgttctggcg
ggtggcgccggacacggcagcggcgggccgcagcctccagtgacaggtcccacgggagct
ggacattcggtggatgaccaggcaggcgcaggcgcaggcagcggcagcggcagcggcagc
ggcagcggcagcggcagcggcagcggcagcggcagcggcagcggcagcactggcactggc
actggcactggcactggcagtggcagtggcagcggtagtggcactggcgacaacggcagc
actgtgaacccagacgtcagccaggaagccgggcatgacgcgtctggcgatccaggcgcg
ccctccgcgcccaacccagaaaatccagtgacgccggtcgatcccatcgattcagtcggt
cccgtcgatcccaccggccccaccgatcctgccgctcccgtcgatccgtctctcccgaca
gatccgatcgtgccggtagatccggtgatcccgatagatcctgtggttccagtcgatccc
accaacccggtggacaccgtcgaaccggtcgatcccattgatcccattgatccagtggat
ccagtggatcccgttgatcccactgatccgatcgatccggttgatcccattgatccagtg
gatcccgttgatcccgttgatccggtggatccgaccgccccggtggatggcacagacccc
gtcgacgaatttccccctccgaggccccagcccccgtcgctctccaccaccgcaccgaca
ttgaccctgctgcgtgacaccggcgcgtcatccaccgaccgcatcaccgcggatggcacc
ctccgaattcaagccctggaccctgaccgcccctgggagttcagcctggacggcgggacc
gtctgggaacttggcaccggccaccaaatccccgcagccaccttcctcggccccggcgct
cacaccgtgctggtgcgacacaccgacggcactgcggccaccagcgacgtcgccagcctc
agcttcgaactggacacccaggccgacgcccccctgctggccctggccgaggacaccggc
gtctccgccacggaccgcatcacccacaacggtcagatccaggtcacggcgctggagcct
ggcgccgtgtgggagttctcgctcgacggcggtgccacatggacggccggccagggcgac
accctggacttggcggccgtcagcggcgcgggcgaccatgaggtccagatccgccagacc
gatctcgcaggcaacgtcagcaacgccgtgcacatcgacctgacgctgctgctggacgcc
ccggccctggacctgcagaccgacgccgggctgcagctccagacgtcccgcgtgttgggc
attgcaagcgccctgcagggcgttcccctggtcgacaccctggcggaactcagccagacc
gatcttcgaacgctgtccctgcgcatcgacagcggcctggccccggacgactgcctgcgg
ttcgacgacggcccggtgctggaccaagacctgcacgccacccacgccacgctggccggc
gtgaccgggctgacctaccacttcgacgcccaactgggactactgaccctccagaaaacc
gatggcagcgcgctgaccggcatggaagccagcacgctggccaatgccttgcgcctggtg
agtctggctgcgctgcccacacccggcgaccgcagcttctccttctggggtgaggacctc
gccggtaacgtgggcgacccgtccaccgtgcgcatcaccgtggacatccgctcaccgatg
ctggacctcaacggcgctcttgccggcgtggagcccctgacccatgtccattccctggaa
ggtccggttcgcctgtttgccagcgacctgaccctcactcacgacaatcccgaggcccgc
tactcgcaggtcaccctgcgcggcttcggcggcggcaccagcttcgaggaccaactggcc
agccagaccggcccgtcgctggtgaccctcaccgacggactgcagtggcagctgggcgac
accgtgtggacggtgagccggatctccacccgttatgccttttccacggcggacggctcg
ctggccagccaggaggcagtcactgcgctgctggagtcactgcggctgatgaatcccctg
acggaacccggacagggcgagcggcgcttcaccgtggtgctgaccgaccacgtgggcaat
accggcgtggcgtccggctccgtcatcctggaccagaccgcgcctgtggccgacctgaac
ggactggcggtcgggcaggaccacggcatgcaggtggtcgccggcgtgggctggatgctg
ccgctcttcaatcccgccacggccgcgctcctcgacgacagccccatcacggtgctgacg
ctgtccttctcttcggcgctctccaacgtcttccagggccaggccggccagcaggaacgc
atcgggctgtccgatggcgacgacaccgatgggctgggccatgccctggtgctgggccag
ggcgggaccgtggtggacgatcaaagcgtgccggggcgcatcatcaccctcaccctgtcg
ggcgatgcgtcgcgtccggtcctcaccctgaccgccgatgcgccgctcacgccggagcag
gtgtcgcaactgctgcagcggctgcgctatgaaggggaggcaggcgcggccctgggggtg
cgcgagatcgccgtcaccgccacggatgtggccggcaacaccaccacgacgccgagtctg
gcccagctggaggtcctgcccgtgggcacgcccctggtgttcctgcacccggacaccgac
agcggcacctacaacagcgacaacatcacccgcatggatgggtcggccgacagcccgttg
cgtctgcgcggtgcaggccgggctggcgccaccctgcacatctacctggatgccaacggc
aacggaacgggcacggccgatgaacgcgtcggcaccgtcgtgtgcgacgcccaggggcgg
tgggagctggcgttgcccgcgcgtccgctggccgatggccaatatccgttcatcgccgtg
gacccggatgcgggactcgtatcccccacgctgaccgtcaccgtggacacccgtccgccg
gccagcgcctacgacatgggggactccgtggcgctgtcgccgcggctgtttggcgtgtcc
gacgccttcgagcgcgtggtggtcgagatcgacaccgacaacaacctgctcaacggctat
gaactgcgttatgaaacccgcgccgacgcggccgggcagtggctgctggacacgcgtgtg
gaccgacccgtcgccgggaccttccagccgttcatgaacggacagacggtgcagacccgt
gtcaccaccttcgacatggccggcaacgccaccgtgcgggaagacgcggcgccggccatc
gcctcggtgttcaacctgtccgacgcgcatgtggtggaaggcgtggatggcacgcgggag
ctggtgttcatggtcacccgcagcggcgatctgagcagcgacggcagcgtgcagtggtcg
gtggacctgttgcgcagctcggccaccgacaatcccgccggcctgctctccgataccgac
ttcaccggcgcggcgtccggacaggtccggttcgcggccggcgagacccagcaactggtg
cgcttcaccgtctccggggattactaccgcgaggtgaacgaacggctgatggtgaatctg
gagcatgcgcagggcggcacgatcggcgacggtctgggcatcggcacgatctacgaggtg
gacattgaccacacgcaggccgcctacagcatgcgcaacctcaatcccaacctgaacacg
gcggccattcgcgttcggcggtcgtcggacaatcaggagcaggacatcggctttgatgcc
aacggcaacctcgacaccgtcgcgcttctgaacttcgtgggccgcagcagcggcgacact
ggctacgtcaccacctggtacgaccagtccggccacggccgcgacatggtgcaggccaat
gcctcgatgcaaggcgtggtggtggacggcggcgtgctggtgacccgggcggacggctcc
gcgggcatcagtttcaacagccgcaatggcgcctcggacgatttcatgacgaccaacggc
gtggccgggaccgattggaccagcgcgttgatctatgccaaggtgcagtcggagggtggc
cagaatggctcgttgttcaaccttgggcccagtggctatggccgtttgagcgcccactac
ccctccaacgcaagcgatggaggcggttatgtcttcgatgtgtcggaatgggatcgcgcg
ggccccgggcgcctcaaccgtgaattgacctcaggccatcagtcgctgatcggtctggcc
aacgacgtggtgtttgaagcgcattccggcaacaccacggccgggtctgcagaactcaat
tacacgaacgccgcacaagccatcttcgagaacggcattcgagtgacgtcggacgcttcg
atgttcgatcgcttctccaccaccaaccaatggttcctggctcgccatggcgtcggcagc
gagtactaccagcgggtgatcttcaatgagttcatggtctacctggacaccggcaacagc
gcgcccaacatgcgctcgctgctgggcaccgccaacgacgacgtgctcacctattctggc
gagaggcagttgcaacgcatcgacggcatggcagggaacgacaccctgtatctgtccggc
gccaccgatctggacttcggccaattcagcggcggcgtgcgtggcatgtcccaggtgtgg
atggacaacgggcaggccaacaccctcacgctgaccaccgccaccctcaccgccaatggc
aatgtcccgctgacggtggtgatggggcaaggcgacagcgtcgtgctcaacggacagcgc
ctgaactatgacgcccagcaggcgcaatcgctggtgatcggcctggacggcgacgaggtg
ctgttcagcaccagccgcaatgacgtgctgcgcggcggcgccggcgcggacaccttcacc
tggcgcgcgaaccagggcggcgtggacacggtggtggacttcagcgatgcgcaaggggac
cgcctggacctcagccagctcctgcagcggatgacggcgggccgggaagagctctacctg
aacaagcagatcgatgccaacgggcaagtcgtcgtgcgggtggacaccgacgggcgcggc
cacttccaggatgcggacctgatcatccagctgggcgccgcccatcccatcgaccccatc
acggtggtcacccactatggcaccgtggtgctgtga
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