Roseateles depolymerans: RD2015_4121
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Entry
RD2015_4121 CDS
T04166
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdp03400
]
RD2015_4121
Enzymes [BR:
rdp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RD2015_4121
DNA repair and recombination proteins [BR:
rdp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RD2015_4121
Prokaryotic type
RD2015_4121
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ALV08570
UniProt:
A0A0U3MW20
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All DBs
Position
4785501..4787084
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AA seq
527 aa
AA seq
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MTNASSHGGSSAAPDPNTALVWFRRDLRADDHAALFHALKRHTRVFCVFVLDTDILDPLP
RADRRVAFILDALRVLDADLGRLADGAGLIVRHGPARKELPAVVAALGAGALYFNHDDEP
DALKRDTAVGDALLSRGVSVQSFKDHVIFERSEILTGSRQPYGVFTPYKNNWLKTVNDFY
LSAYPVSRYARHLAPLTDALQADLAALPASSRSHAKAATPKHHRRVPTLEEIGFESVAVN
PKLMDGSDGAQRLFKDFLTRIDRYDEQRDFPAVKGPSYLSVHLRFGTVSIRQLAREASAR
ARKGNEGAQTWLSELIWRDFYHQVMHHHPHVVGQAYRPEYDRIQWESGAEAERLFKAWCE
GRTGYPIVDAAMTQLNETGYMHNRLRMVTASFLIKDLGIDWRWGERYFAQQLLDFDLAAN
NGGWQWAASSGCDAQPYFRIFNPVSQSEKFDGDGKFIKRYLPVLEKLPPKLIHAPWTARA
VELQACGVTLGRDYPEPIIRHEVARMATLDRYSVVKDRKLPEGAAEA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgcctcctcccacggcggctccagcgccgcccccgatccgaacaccgccctg
gtctggttccgccgcgacttgcgggccgacgaccatgccgccctcttccacgccctcaag
cgccacacccgggtgttttgcgtgttcgtgctggacaccgacatcctggaccccctgccc
cgcgccgaccgccgtgtcgccttcatcctggacgcgctgcgggtgctggacgccgacctg
ggccggctggccgacggtgccggcctgatcgtgcggcatggcccggcccggaaggaactg
cccgccgtggtggcagcgctgggcgcgggcgcgctctacttcaatcacgacgacgagccg
gacgccctgaaacgggacaccgccgtcggcgacgccctgctgagccgcggcgtgtcggtg
cagagcttcaaggaccatgtcatcttcgagcgctcggagatcctgaccggcagcaggcag
ccctatggcgtgttcacgccctacaagaacaactggctcaagaccgtcaacgacttctac
ctcagcgcctacccggtcagccggtatgcgcgccacctggcaccgctgaccgatgcgctc
caggccgacctggcggccctgcccgcctcatcccgctcccacgccaaggccgcgacgccg
aaacaccaccgacgggtgccgacgctcgaggagatcggattcgagtcggtggcggtcaac
cccaagctgatggacggcagcgacggcgcacagcggctgttcaaggacttcctcacccgc
atcgaccgctacgacgagcagcgggacttccccgccgtgaagggccccagctacctgagc
gtgcatctgcgattcgggacggtgtccatccgccagttggcccgcgaagccagcgcccgg
gcccgcaagggcaacgagggcgcgcagacctggctgtccgagttgatctggcgcgatttc
taccaccaggtcatgcatcaccatccgcatgtggtgggccaggcctaccggccggaatac
gaccgcatccagtgggaaagcggagccgaggccgagcggcttttcaaggcctggtgtgaa
ggacgcaccggctaccccatcgtggacgccgccatgacccagctcaacgagaccggctac
atgcacaaccggctgcgcatggtgacggccagcttcctgatcaaggacctgggcatcgac
tggcgctggggggagcggtacttcgcgcagcagttgctggacttcgacctggccgccaac
aacggcggctggcaatgggcggcctccagcggctgtgatgcgcagccgtatttccgcatt
ttcaatccggtcagccagagcgagaaattcgatggcgacggcaaattcatcaagcgctac
ctgccggtgctggagaagctgcccccgaagctgatccacgcgccctggacggcccgcgcg
gtggaactgcaggcctgcggcgtgacgctgggccgcgactatccggaaccgatcatccgg
cacgaggtggcgcgcatggcgacgctggaccggtattcggtggtcaaggaccgcaagctg
ccggaaggggcggccgaggcctag
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