Roseateles depolymerans: RD2015_4235
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Entry
RD2015_4235 CDS
T04166
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rdp03000
]
RD2015_4235
Transcription factors [BR:
rdp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RD2015_4235
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
CtIP_N
Motif
Other DBs
NCBI-ProteinID:
ALV08682
UniProt:
A0A0U3MWD7
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Position
complement(4917252..4918190)
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AA seq
312 aa
AA seq
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MFGVEQLNFRHLFYFWQVARTGHLTQAAQQLHVSQSALSSQIRQLEDRLGEPLFERSGRR
LVLTERGQLVLSYAENIFGLGRELLGRLQGHSEGVEHLRVGSVATLSRNYLENWIRPLLT
DPTVTLSLESGLLEGLVARLLEHHLDVVLANEAVAASADRPLHCRFLGSQAISLVGGANE
WRGRTLRMPQDLDGRELALPGPRHALRGQFDALCVAAGVTPRLRAEVDDMAMLRLVARDS
GWLTVLPEVVVQDELRTGVLVTVARSTELRENFYAITTLHRHRMERLERLLAHAPLLSHE
DSPSPADGRMPT
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcgtcgagcagctgaatttccggcacctgttctacttctggcaggtggcccgg
accgggcacctcacccaggcggcccagcagctgcatgtgtcgcagtcggcgctgtccagc
cagatccgccagctggaagaccggctgggcgagccgcttttcgagcgcagtggacggcgc
ctggtgctgaccgagcgcgggcaactggtgctgtcctatgccgagaacatcttcggcctg
ggtcgtgaactgctcgggcgcctgcagggccacagcgaaggcgtggagcatctgcgcgtg
ggcagtgtcgccacgctgtcgcgcaactacctggagaactggatccggccgctgctgacc
gaccccacggtcacgctgtcgctggagtcgggcttgctggaaggcctggtcgcacgcctg
ctggagcatcacctggatgtggtgctggccaacgaagcggtggccgccagcgcggaccgt
ccgctgcattgccgtttccttggcagccaggcgatttcgctggtggggggcgcgaatgag
tggcggggacgaacccttcgcatgccgcaggacctggacggccgcgagctggccctgccc
ggtccgcgccacgccttgcgcggacagttcgatgcgctgtgcgtggcggccggcgtgacg
ccccggctacgggccgaggtcgacgacatggccatgctgcgtctggtcgcccgcgacagt
ggctggctgacggtgctgcccgaagtggtggtgcaggacgagctgcgcacgggggtgctg
gtgacggtggcgcggtccaccgaactgcgcgagaacttctacgccatcaccaccttgcat
cgtcaccggatggaacggctggagcgactgctggcgcatgcgccgctgctgtcgcatgag
gacagtccgtcaccggccgatgggcgaatgccgacctga
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