Roseateles depolymerans: RD2015_4338
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Entry
RD2015_4338 CDS
T04166
Name
(GenBank) Hydroxymethylglutaryl-CoA lyase YngG
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp00280
Valine, leucine and isoleucine degradation
rdp00650
Butanoate metabolism
rdp00907
Pinene, camphor and geraniol degradation
rdp01100
Metabolic pathways
rdp01120
Microbial metabolism in diverse environments
rdp04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
RD2015_4338
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RD2015_4338
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RD2015_4338
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RD2015_4338
Enzymes [BR:
rdp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
RD2015_4338
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
ALV08781
UniProt:
A0A0U3MJ99
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All DBs
Position
complement(5053259..5054194)
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AA seq
311 aa
AA seq
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MNAMFNRSSGSLPSRVTLVDVGPRDGLQNEKAQVGTAEKAQLVGMLQAAGLKEIEVTSFV
SPKWIPQMADNTAVMAAVERRPGVRYSVLVPNMKGLEAALPTRPDEVVVFAAASEAFSQK
NINCSIAESIERFAPVVAAAHEAGLKVRGALSCAVGCPYQGAVSPDEVDRVAGLLRSVGV
DHLGVADTIGVGTPRQVQAAMERALKHFPLVEVSGHFHDTYGQALTNIYACLEMGIHSFD
ASVAGLGGCPYAKGATGNVATEDVVFMLHGLGIETGIDLDLLVDAGAFISGVLGRPPASR
VGRAVLAKRQG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgatgttcaatcgctcgtccgggtcgctaccgagccgggtcacactcgtggat
gtggggccgcgggatgggctgcagaacgagaaggcccaggtcgggacggccgagaaggcg
cagctcgtggggatgttgcaggcggcagggctgaaggagatcgaggtcaccagcttcgtg
tcgcccaagtggatcccgcagatggccgacaacaccgccgtgatggcggcggtggagcgg
cggcccggcgtgcgctacagcgtgctggtgcccaatatgaaagggctggaggccgccctg
ccgacgcggccggacgaggtggtggtgtttgccgcggcgtcggaggcgttttcgcagaag
aacatcaattgctcgatcgcggagagcatcgagcggttcgctccggtggtggcggctgcg
catgaggcaggcttgaaggtgcggggggcgttgtcctgcgcggtggggtgcccgtatcag
ggcgccgtgtcacccgatgaggtggaccgggtggcggggttgctccggtcggtgggggtg
gaccatctcggcgtggccgacaccatcggggtggggacgccgcgtcaggttcaggctgcg
atggaacgggcgctcaaacacttcccgttggtggaggtgagcgggcatttccacgatacc
tatgggcaggcgttgaccaacatctacgcttgtctggaaatgggcattcacagtttcgac
gctagcgtggcagggctggggggctgcccttacgcaaagggcgccacagggaatgtggcg
accgaggacgtggtgttcatgctccacgggttggggatcgagacaggcattgacctcgat
ctgctggtggacgctggggcgtttatctcgggagtgctggggcggccgcccgcctctcgc
gtaggccgcgcggtgctggccaaaaggcaagggtga
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