Roseateles depolymerans: RD2015_4432
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Entry
RD2015_4432 CDS
T04166
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp00061
Fatty acid biosynthesis
rdp00071
Fatty acid degradation
rdp01100
Metabolic pathways
rdp01212
Fatty acid metabolism
rdp02024
Quorum sensing
rdp04146
Peroxisome
Module
rdp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RD2015_4432
00071 Fatty acid degradation
RD2015_4432
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RD2015_4432
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD2015_4432
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rdp01004
]
RD2015_4432
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rdp04147
]
RD2015_4432
Enzymes [BR:
rdp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RD2015_4432
Lipid biosynthesis proteins [BR:
rdp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RD2015_4432
Exosome [BR:
rdp04147
]
Exosomal proteins
Exosomal proteins of breast milk
RD2015_4432
Exosomal proteins of breast cancer cells
RD2015_4432
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
CARME
Motif
Other DBs
NCBI-ProteinID:
ALV08873
UniProt:
A0A0U3MK77
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All DBs
Position
5164760..5166487
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AA seq
575 aa
AA seq
DB search
MTAVTMTAETPTVTYADKPWLASYPQGVAAEIPLDRYGSLVELLEEAFRVHAGRDAAVCM
DQRLTFAQVDEHSRALGAWLQGRGLAKGARVAIMMPNVLQYMVTIAAILRAGYVVVNVNP
LYTPRELEHQLKDSGAEAIIVLENFAKTLSEVIERTQVRHVVLTGLGDMLGVLKGPLINF
AVRHLKKMVPEFRLPMTQGRSVTRFKQALSQGAHAQLQPVTLRADDPAFLQYTGGTTGLS
KGATLLHRNVVANILQSEAWFSPMLGKLGNRPLTIVCALPLYHIFALTACYMLGARLGMM
NLLIPNPRDIPGFVATLRNYKVNMFPAVNTLFNALANDPAFAKLDFSELVISNGGGMAVQ
QATAEKWQRITGCAVVEGYGLSETSPVATVNRLDLSSFNGSIGLPVPNTEIAIRDDAGRD
VPLGERGEICIRGPQVMAGYWNRPEETAQAIGPDGFFKTGDIGVMDEQGFTRIVDRKKDM
ILVSGFNVYPTEIEQVVNMHPGVLECAAVGVPDPHSGEAVKLFVIKKDPALAEEDLSAYC
HAQFTGYKRPKYIEFRDDLPKTNVGKILRRELRQH
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgtgaccatgactgctgaaacaccgaccgtgacctatgccgacaagccttgg
ctggcgagttatccgcaaggcgtggcggctgagattccgctggatcgctatggctcgctg
gtggagctactggaagaggcgttccgtgtgcatgctggccgggatgcggcggtgtgcatg
gaccagcggctgactttcgcgcaggtcgatgagcattcccgggcgctgggtgcctggctg
caggggcgcgggctggccaagggcgcacgggtggccatcatgatgcccaatgtgctgcag
tacatggtgaccattgccgccatcctgcgtgcggggtatgtggtggtgaacgtgaatccg
ctgtacacgccgcgggagctggagcatcaactcaaggattcgggggcggaagccatcatc
gtcctggagaattttgcgaagactttgtccgaggtcattgaacgcacgcaggtgcggcat
gtggtgctgacggggctgggcgacatgctgggcgtgctgaaagggccgctgatcaatttt
gcggttcggcatttgaagaagatggtgccggagttccggttgccgatgacacaaggtcgc
agcgtgacgcgcttcaagcaggccctgtcccagggcgcgcatgctcaactgcagccggtc
acgttgcgagccgacgatcccgcattcctccaatacaccggcggtaccaccggcctgtcc
aagggtgcgacgctgctgcatcgcaatgtggtggccaatatcctgcaaagcgaagcctgg
ttctcgccgatgctgggcaagctcggcaataggccgctcaccatcgtctgcgcgctgccg
ctgtatcacatcttcgcgctgacggcctgctacatgctgggggcgcggctggggatgatg
aacctgctgattccgaacccacgcgacattcctggcttcgttgcgaccttgcggaactac
aaggtcaatatgttcccggcggtcaacacgctgttcaacgcgctggccaatgacccggcg
tttgccaagctggatttcagcgagctggtcatctccaatggcggcggcatggcggtgcag
caggccactgccgagaaatggcagcgcatcaccgggtgcgcggtggtggaaggttatggg
ttgtcggaaacgtcaccggtggccaccgtgaatcgtctggacctcagcagtttcaacggg
tcgatcgggttgccggtgcccaataccgagattgcgatccgcgacgacgccggccgggat
gtgccgctgggggagcgcggcgagatctgcatccgcggaccgcaggtgatggcgggctat
tggaatcggccggaggaaacggcgcaggcgatcggcccggatggttttttcaagacgggc
gatatcggcgtcatggacgagcagggtttcacccgcatcgtggaccggaagaaggacatg
attctggtgagtggcttcaatgtctatccgaccgagatcgagcaggtggtgaacatgcac
cccggcgtgctggagtgtgcggcggtcggggtgccggatccccactcgggggaggcggtg
aagctgtttgtgatcaagaaggatcccgcgttggccgaggaagacctcagcgcctattgc
catgcccagttcacgggctacaaacgccccaaatacatcgagttccgggatgacctgccg
aagaccaatgtgggcaagatcctgcggcgggagctgcggcagcactga
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