Roseateles depolymerans: RD2015_4649
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Entry
RD2015_4649 CDS
T04166
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp00061
Fatty acid biosynthesis
rdp00071
Fatty acid degradation
rdp01100
Metabolic pathways
rdp01212
Fatty acid metabolism
rdp02024
Quorum sensing
Module
rdp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RD2015_4649
00071 Fatty acid degradation
RD2015_4649
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD2015_4649
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rdp01004
]
RD2015_4649
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rdp04147
]
RD2015_4649
Enzymes [BR:
rdp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RD2015_4649
Lipid biosynthesis proteins [BR:
rdp01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
RD2015_4649
Exosome [BR:
rdp04147
]
Exosomal proteins
Exosomal proteins of breast milk
RD2015_4649
Exosomal proteins of breast cancer cells
RD2015_4649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ALV09090
UniProt:
A0A0U3LRM9
LinkDB
All DBs
Position
complement(5455529..5457202)
Genome browser
AA seq
557 aa
AA seq
DB search
MEKTWLKHYPAGMPAEINADVYPSLVELMETAFKQFPAQPAYKMLGRSVSYAQIDEASRA
LAAYLQGLGLEKGDRVAIMMPNVPQYPVAVAAVLRAGFVVVNVNPLYTPRELEHQLKDAG
AKAIVIIENFAATLQQVLAHVPTKHVVLASMGDMLGFVKGAVVNYVVRKVKKLVPAFELP
TAVRFNDALAQGRGKTYSRPVVGPSDIAVLQYTGGTTGVSKGAVLLHRNLVANTLQCEAW
YQPALRKIPKDEQLVSICALPLYHIFGFTTNLMLSMRVGGCNVLIPNPRDLPAVFKELSQ
HRFHSLPAVNTLFMAMANHPSFGTVDWSGLVISVGGGMAVQQATAKQWLDKTGCPIVEGY
GLSETSPVACCNPTDSTAYTGSIGLPLPGTEVTLLDDDGREVPLGTSGEIAIRGPQVMAG
YWQRPDETAKVMTSDGYFRTGDIGTVDERGYFRIVDRKKDMILVSGFNVYPNEVEDVLTL
MPGVLECAAVGVPDEKAGEAVKVVIVRKNPALTEADVKAYCEANLTGYKRPRIIEFRTEL
PKTPVGKVLRRELRDKK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaacctggctgaagcactatccggcaggcatgcctgccgagatcaatgcggat
gtctatccttcgctggtcgagctgatggaaactgcattcaagcagttcccggcgcagccg
gcctacaagatgctgggccgctcggtcagctatgcgcagatcgacgaggcctcccgtgcc
ctggccgcctatctccagggcctggggctggagaagggcgaccgtgtcgccatcatgatg
cccaacgtgccgcaatatccggtggcggtggcggccgtgctgcgcgccggcttcgtggtg
gtgaacgtgaatccgctctacacgccgcgtgaactggagcaccagctcaaggacgccggt
gccaaggccatcgtcatcatcgaaaacttcgccgcgacgctgcagcaggtgctggcccat
gtgcccaccaagcatgtggtgctggcctcgatgggcgacatgctgggcttcgtcaagggc
gcggtggtcaactatgtggtgcgcaaggtcaagaagctggtgccggccttcgagctgccc
actgccgtgcgcttcaacgacgccctggcgcaaggccgcggcaagacctactcgcgtccg
gtcgtcggcccgagcgacattgccgtgctgcagtacaccggcggcaccaccggcgtgtcc
aagggcgcggtgctgctgcatcgcaacctggtggccaacaccctgcagtgcgaggcctgg
taccagccggccctgcgcaagatccccaaggacgagcagctggtcagcatctgcgcgctc
ccgctctatcacatcttcggtttcacaaccaacctgatgctgtcgatgcgggtgggcggc
tgcaatgtgctgatccccaacccgcgcgacctgccggccgtgttcaaggaactgagccag
caccgcttccacagcctgccggcggtcaacacgctgttcatggccatggccaaccacccg
tccttcggcacggtggactggagcgggctggtgatctcggtgggcggcggcatggccgtc
cagcaggccacggccaagcagtggctggacaagaccggctgcccgatcgtggaaggctac
ggcctgtcggagacctcgcccgtcgcctgctgcaacccgaccgacagcaccgcctacacc
ggctccatcggcctgccgctgcccggcaccgaggtgacgctgctggatgacgacggtcgc
gaggtgccgctgggcacctccggcgagatcgccatccgcggcccgcaggtgatggccggt
tactggcagcgcccggacgagaccgccaaggtgatgacctcggacgggtatttccgcacc
ggcgacatcggcacggtggacgagcggggctacttccgcattgtggaccgcaagaaggac
atgatcctggtcagcggcttcaacgtctatccgaacgaagtcgaggatgtgctgaccctg
atgccgggcgtgctggaatgcgcggctgtcggcgtgccggacgaaaaggccggcgaggcc
gtcaaggtggtgatcgtccgcaagaatccggcgctgaccgaggcggatgtgaaggcctac
tgcgaagccaaccttaccggctacaagcgtccgcgcatcatcgagttccgcaccgagctg
cccaagacgccggtcggcaaggtattgcgacgtgagcttcgcgacaaaaagtag
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