Roseateles depolymerans: RD2015_4675
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Entry
RD2015_4675 CDS
T04166
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
rdp
Roseateles depolymerans
Pathway
rdp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RD2015_4675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdp03400
]
RD2015_4675
DNA repair and recombination proteins [BR:
rdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RD2015_4675
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RD2015_4675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
nSTAND3
AAA_25
AAA_21
NACHT
DUF2972
Motif
Other DBs
NCBI-ProteinID:
ALV09116
UniProt:
A0A0U3MNN7
LinkDB
All DBs
Position
5483362..5486382
Genome browser
AA seq
1006 aa
AA seq
DB search
MPTNVSPANTVTSDVADALEQRGPTLPGPTTTAPVPASVPAPAPVDVPMIRVRGARTHNL
KNIDVDLPRNKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLQLMDKPEVD
VIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARAGTPFCPDHHLPLEAQSVGQ
MVDAVLAMPDESRLMLLAPVVRDRKGEFVELFQDLQAQGYVRFRVDGRTVEVPDLPALKK
AEKHDIDVVVDRIKLRHDSADSLRQRLAESFEAALRLADGRVLVLNMDTEAESIFSSKFA
CPICSYSLPELEPRLFSFNSPVGACPSCEGLGQVVVFDPERVVAFPSLSMASGAVKGWDR
RNAYTFSMLESVAKHYDFDIEQPFEELPPLAQQVLLQGSGDEEITFVYQAEGANGRKRSV
KRAHPFEGILPTLQRRFKETDSATVREELARYQSAKPCPHCEGSRLRREARNVLLQPADA
PEGVRGKPIYEVEHATLREALAYFEQLRLKGAKAEIADKVIREIASRLRFLNDVGLNYLS
LDRSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIATLRRLRDLGN
SVLVVEHDEDAIRAADHVLDLGPGAGVHGGRIMAQGTPEEVAATPGSSTGRYLSGLERIE
VPRKRHSLADLPDARTLKIVNATGNNLKGVSVEIPVGLLTCVTGVSGSGKSTLVNDTLYA
AVSRKLYQSHQEPAPHDEIDGMEAFDKVINVDQSPIGRTPRSNPATYTGLFTPIRELFAE
MPTARERGYGAGRFSFNVAGGRCESCQGDGVLKVEMHFLPDVYVPCDTCGGKRYNRETLE
VLYKGKNISEVLGLTVEDALEFFSAVPTLARKLQTLMDVGLGYVKLGQSATTLSGGEAQR
VKLALELSKRDTGRTLYILDEPTTGLHFADIALLLKVLHQLRDAGNTIVIIEHNLDVIKT
ADWLIDMGPEGGSGGGELLVAGTPEVVAACEASHTGRYLKPLLARG
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccaatgtttcgcccgccaataccgtgacgtccgatgtggccgatgccctggag
caacggggccccacgctgcccggcccgaccaccaccgcgccagtccccgcgtcggtcccc
gcccccgcccctgtggacgtgccgatgatccgcgtgcgcggcgcgcgcacccacaacctc
aagaacatcgacgtcgacctgccccgcaacaagctggtggtcatcaccggcctgtcggga
tcgggcaagtccagcctggccttcgacacgctgtacgcggaaggccagcgccgctatgtg
gagagcctgtcggcctatgcccgccagttcctgcaactgatggacaagccggaggtggat
gtcatcgagggcttgtccccggccatctccatcgagcagaaggccaccagccacaacccg
cgctccaccgtgggcacggtgaccgagatccatgactacctgcggctgctgtacgcccgc
gccggcacgcccttctgcccggaccaccacctgccgctggaggcacaaagcgtcggccag
atggtggatgcggtgctggcgatgccggacgaatcccgcctgatgctgctggcgccggtc
gtgcgcgaccgcaagggcgagttcgtcgaactgttccaggacctgcaggcccaggggtat
gtgcgcttccgggtggatggccgcacggtggaagtgccggacctgcccgccctgaagaag
gcggagaagcacgacatcgacgtggtggtggaccgcatcaagctccgtcacgacagcgcc
gacagcctgcgccagcgtctggccgaaagtttcgaagccgcgctgcgcctggccgatggc
cgggtgctggtgctcaacatggacaccgaggccgagtccatcttctccagcaagtttgca
tgtccgatctgcagctattcgctgccggagctggagccgcggctgttctccttcaattca
ccggtgggcgcctgcccgtcctgcgagggcctgggacaggtcgtggtcttcgacccggaa
cgggtggtggccttcccgtcgctcagcatggccagcggcgcggtgaagggctgggaccgt
cgcaatgcctacaccttctccatgctggagtcggtggccaagcattacgacttcgacatc
gagcagcccttcgaggaactgccacccctggcgcagcaagtcctgctgcagggctccggg
gatgaagagatcacctttgtctatcaggccgaaggcgccaatggccgcaaacgcagcgtg
aagcgggcccatcccttcgaaggcatcctgccgacgctgcaacgccgtttcaaggaaacc
gattccgccacggtgcgcgaagagctggcgcgttaccagagcgccaagccctgcccgcac
tgcgagggctcccgcctgcgccgggaagcgcgcaatgtgctgctgcaaccggccgatgcg
ccggaaggagtgcgcggcaagcccatctacgaggtggagcacgccaccttgcgggaagcc
ctggcctatttcgagcagctgcggctcaagggcgccaaggcggaaatcgcggacaaggtg
atccgggagatcgcctcccggctgcgtttcctcaacgatgtcggcctgaactacctgagc
ctggatcgcagcgcggacacgctctccggcggcgaggcccagcgcatccggctggcctcc
cagatcggctccggcctgaccggggtgatgtatgtgctggacgagcccagcatcggcctg
catcagcgcgacaacgaccgtctcatcgccacgctgcgccgtctgcgcgacctgggcaac
agcgtgctggtggtcgagcatgacgaagacgccatccgcgccgccgaccatgtgctggac
ctgggccccggcgctggtgtgcacggcggccgcatcatggcgcagggcacgccggaggaa
gtggcggccacgcccggatcgtccacgggccgctacctcagtggcctggagcggatcgag
gtgccgcgcaagcgccattcgctggccgacctgccggatgcccgcaccctcaagatcgtc
aatgccaccggcaacaacctcaagggggtgagcgtcgagattccggtcgggctgctgacc
tgcgtgaccggtgtgtcgggctcgggcaagagcacgctggtgaacgacacgctgtatgcc
gccgtgtcccgcaagctctaccagagccatcaggaaccggcgccgcatgacgagatcgac
ggcatggaggccttcgacaaggtcatcaatgtggaccagtcgccgatcggtcgcacgcct
cgctccaatcccgccacctacaccggcctgttcacgccgatccgcgagctctttgccgaa
atgccgaccgcccgggagcgggggtatggcgccggccgcttcagcttcaacgtcgcgggg
ggacgctgcgagtcctgccagggtgacggcgtgctgaaggtggagatgcatttcctgccg
gacgtctacgtgccctgcgacacctgcggcggcaagcgctacaaccgggaaacactggag
gtgctctacaagggcaagaacatttccgaagtgctggggctgacggtggaggatgcgctg
gaattcttcagcgcggtgccgacgctggcgcgcaagctgcagaccctgatggacgtgggc
ctgggctacgtgaagctgggccagagcgccaccaccttgtccggcggcgaggcgcagcgg
gtgaagctggcgctggaactgtccaagcgggacaccgggcgcaccctctacatcctggac
gagcctaccaccggcctgcacttcgccgacatcgcactgctgctcaaggtgctgcaccag
ctgcgcgacgcgggcaacaccatcgtcatcatcgagcacaacctggacgtcatcaagacg
gcggactggctgatcgacatggggccggagggcggctccggcgggggagagctgctggtg
gcgggcacgccggaggtggtggctgcctgcgaggccagccacaccgggcgttatctgaag
ccgctgctggcgcgaggctga
DBGET
integrated database retrieval system
