Roseateles depolymerans: RD2015_4786
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Entry
RD2015_4786 CDS
T04166
Name
(GenBank) Two component, sigma54 specific, transcriptional regulator, Fis family
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
rdp
Roseateles depolymerans
Pathway
rdp02020
Two-component system
rdp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD2015_4786
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD2015_4786
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rdp02022
]
RD2015_4786
Two-component system [BR:
rdp02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
RD2015_4786
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Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
FleQ
AAA_16
AAA
OKR_DC_1_N
MCM
Mg_chelatase
AAA_30
nSTAND6
AAA_3
nSTAND3
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
ALV09224
UniProt:
A0A0U3CKU2
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Position
complement(5611948..5613270)
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AA seq
440 aa
AA seq
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MTGPRLLVVDDDADLLKLLSMRLDAAGYEVTAVASAEAALTHLAVQRPALVLSDVQLPGM
DGLALFDAIRERHPALPVILLTAHGTIPDAVAATARGVYTYLTKPFDGRALLDTIAQALA
LTAPAGDAQDAGDTEWRQGIVSRSNVMAEVLAEAKLVAASQASVLIRGESGTGKELLARA
IHAASPRAGKPFVAVNCGAIPEALLESELFGHVKGAFTGAVSHHRGLFQAADGGTLLLDE
IGDMPLPLQVKLLRVLQEQQVRPVGSSESLPIDVRILSATHRDLDVAMAEGLFREDLYYR
LNVVSLTLPSLSERREDIPLLAQHLLTRLADKYNKRLNGFAPEAMKALSMATWPGNVRQL
HNVVEQVCALATSPLIPLSLVQRALRVPSMEVLSYAQARERFEREYLVGLLSSPTATWRT
LHGWPSATARSSTVCCSATA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtccgcgcctgctggtggtcgatgacgacgccgacctgctcaagctgctgtcg
atgcggctcgatgccgccggctacgaggtcacggccgtcgcgtcggccgaggccgcgctg
acgcacctggcggtgcagcggcccgccctggtgctgagcgacgtgcaattgcctggcatg
gatggcctggccctgttcgatgccatccgcgaacgccaccccgccctgccggtgatcctg
ctgaccgcccacggcaccatccccgatgccgtggccgccacggcgcgcggggtctacacc
tatctcaccaaacctttcgacggccgggccctgctggacaccattgcccaggccctggct
ctgacggccccggcgggcgatgcgcaggacgcgggcgacaccgagtggcgccagggcatc
gtcagccgctccaacgtcatggccgaggtgctggccgaggccaagctggtggccgcctcc
caggccagcgtgctgatccgcggcgaaagcggcaccgggaaggaactgctggcccgcgcc
attcatgccgccagcccgcgcgcgggcaagccgtttgtggcggtgaactgcggcgccatt
ccggaggcgctgctggagtccgagctgttcggtcatgtgaagggcgccttcaccggggcg
gtcagccaccaccggggtctgttccaggctgccgacggcggcacgctgctgctcgacgag
atcggagacatgccgctgccgctgcaggtcaagctgctgcgggtgctgcaggaacagcag
gtgcggccggtggggtccagcgagtccttgcccattgatgtgcgcattctctcggccacc
catcgggacctggacgtggccatggccgaaggcctgttccgcgaggacttgtattaccgg
ctcaatgtggtcagcctcacattgcccagcctgagcgagcgccgcgaggacataccactg
ctggcccagcatctgctcacgcgcctggccgacaaatacaacaagcggctcaacggcttt
gcgccggaggcgatgaaggccctgagcatggccacctggcccggcaatgtccgccaactg
cacaacgtggtggagcaggtgtgcgcgctggccacctcgccgctgattccgctgtcgctc
gtgcaacgggcgctgcgagtgcccagcatggaagtgctgagctacgcccaggcccgtgaa
cgcttcgagcgggaatacctggtgggcctgctcagctcaccgacggcaacgtggcggacg
ctgcacggctggccgagcgcaaccgcacggagttctaccgtttgctgcagcgcaacggcc
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