Roseateles depolymerans: RD2015_4841
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Entry
RD2015_4841 CDS
T04166
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rdp03016
]
RD2015_4841
Transfer RNA biogenesis [BR:
rdp03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
RD2015_4841
Prokaryotic type
Methyltransferases
RD2015_4841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
Ras
Roc
MCM
ABC_tran
AIG1
Motif
Other DBs
NCBI-ProteinID:
ALV09276
UniProt:
A0A0U3MP35
LinkDB
All DBs
Position
complement(5677027..5678481)
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AA seq
484 aa
AA seq
DB search
MLSRHQDPIAAIATAPGRGAVGIVRVSSPQDLSALVTAVCGRPLKPREATYLPFRSAQGE
AIDHGLALLFPAPHSYTGEHVLELQAHGGPVVLQLLLARCLEADPALRIRLAEPGEFTRR
AFLNGKLDLAQAEAVADLIDASTEAAARSAGRALAGALSGEVGQLRDALIQLRMLVEATL
DFPEEEIDFLQQADALGKLRRLLERLDALLDRSRQGAILREGIKVVLAGQPNVGKSSLLN
ALAGAELAIVTPIPGTTRDKLSQTIQIEGVPLHISDTAGLRDTDDEVERIGVARSWDAIR
EADVVLFLHDLTRMGQADYEREDAEIRSRLSGVEPARILQVYNKADASAPSEAGAAAPTS
VDAPRDNSTGATAATGAPTTTDVLRLSAKTGAGLDVLRQRLLQQVGWHAVPEGLFIARER
HVQALRRTREHVDLALQQAAQEPAALDLMAEELRLAHDALGEITGAFTADDLLGEIFSRF
CIGK
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgcgccaccaggaccccatcgccgccattgccaccgcgcccggtcgaggcgcg
gtgggcattgtccgagtctcatctccccaggatctttccgcgctggtgaccgccgtctgc
ggtcgtcccctcaagccgcgcgaagccacctatctcccgttccgcagcgcgcagggcgag
gccatcgatcacggcctggccctgctgtttccggcgccccacagctacaccggcgagcat
gtgctggagctgcaggcccacggtggtccggtggtgctgcagctgctgctggcccgttgc
ctggaggcggacccggccctgcgcatccgcctggccgagcccggcgaattcacccggcgc
gccttcctcaacggcaagctggacctggcccaggcggaagcggtggcggacctgatcgat
gccagcacggaagcggcggcacgcagcgccggtcgggcactggcgggggcgctcagcggt
gaggtggggcagctccgcgacgcgctcatccagctgcgcatgctggtggaggcgacgctg
gacttcccggaggaagagatcgacttcctgcagcaggccgatgcgctgggcaaactccgg
cgactgctggagcggctggatgcgctgctggatcgcagccgccagggggccatcctgcgg
gaaggcatcaaggtcgtgctggcggggcagcccaatgtgggcaagagctcgctgctcaat
gcactggcgggggcggaactggcgatcgtgacgcccattccgggcacgacgcgcgacaag
ctgagccagaccattcagatcgaaggcgtgccgctgcacatcagcgacacggcgggtttg
cgggacacggacgacgaggtcgagcgcattggcgtggcccgcagctgggacgccatccgc
gaggccgacgtcgtcctgttcctgcacgacctgacccgcatgggtcaggcggattacgag
cgcgaggacgcggagatccgcagccgtttgtccggcgtggaaccggcgcgcatcctgcag
gtctacaacaaggcggatgcgtcggcgcccagtgaggcgggggccgccgcacctacctct
gtggacgcgccgagggacaacagcacgggtgccaccgctgccacgggtgcccccaccacc
accgacgttctacggctctccgccaaaaccggcgcgggcctggacgtgctccggcagcgc
ctgctccagcaggtcggctggcatgccgtgccggaaggtttgttcattgcgcgcgagcgt
cacgtgcaggccctgcgccgcacccgcgagcatgtggacctggccttgcagcaggccgcg
caggaacccgccgcgctggacctgatggcggaggagctgcgactggcgcatgacgcgctg
ggcgagatcaccggcgccttcacggcggacgacctgctgggcgagatcttcagccggttc
tgcatcggcaagtga
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