Roseateles depolymerans: RD2015_581
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Entry
RD2015_581 CDS
T04166
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RD2015_581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rdp03021
]
RD2015_581
03400 DNA repair and recombination proteins [BR:
rdp03400
]
RD2015_581
Enzymes [BR:
rdp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RD2015_581
Transcription machinery [BR:
rdp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RD2015_581
DNA repair and recombination proteins [BR:
rdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RD2015_581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ALV05079
UniProt:
A0A0U3LJP6
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All DBs
Position
661129..662121
Genome browser
AA seq
330 aa
AA seq
DB search
MQTNLLKPKSITVEPLGGHRAKVILEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAG
VLHEYSAIDGVQEDVVHIMLNLKGVVFRLHNREEVTLVLRKEGEGPVTAADIQTPHDVEI
INPEHVIAHLSQGGKLDMQIKVEKGRGYVPGNMRRYGDEPTKAIGRIVLDASFSPVKRVS
YAVENARVEQRTDLDKLVMEIETNGAISPEEAIRASAKILVEQLAVFAQLQGTDLVDAFD
QAPAARSSSFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKS
LNEIKEVLASRGLTLGSRLENWPPQGLDKR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgaatctgctcaaacccaaatccatcactgtggagcccctgggcggtcatcgc
gccaaggtgatcctggagccgtttgaacgcggctatggccacacgctgggcaacgccctg
cgccgtgtgctgctgtcttcgatggtgggttatgcgccgacggaagtgacgatcgcaggc
gtgctccacgagtactccgccatcgacggcgtgcaggaagacgtggttcacatcatgctg
aacctcaagggcgtggtgttccgcctgcacaaccgcgaagaagtgaccctggtcctgcgc
aaggaaggcgaaggtcccgtgaccgccgctgacatccagaccccgcacgacgtcgagatc
atcaaccctgagcatgtcatcgcccatctgtcgcaaggcggcaagctggacatgcagatc
aaggttgagaagggccgcggctatgtccccggcaatatgcgccgttatggcgacgagccg
accaaggccatcggccgcatcgtcctcgacgcttcgttctccccggtcaagcgcgtcagc
tacgccgtggaaaacgcccgtgtggaacagcgcaccgacctggacaagctggtcatggag
atcgaaaccaacggtgcgatctctcccgaggaagccatccgcgcttccgccaagatcctg
gtggagcaactggccgtgttcgcccagctgcaaggcaccgatctggtggacgcgttcgac
caggccccggccgcccgctccagcagcttcgatccgatcctgctgcgcccggtggacgag
ctcgaactgaccgtgcgttcggccaactgcctgaaggccgaaaacatctactacatcggt
gacctgatccagcgcaccgagaccgagctgctcaagaccccgaacctgggtcgcaagtcg
ctcaacgagatcaaggaagtgctcgcttcgcgcggcctgaccctgggctcgcgtctcgag
aactggccgccgcaaggtctcgacaagcgttga
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