Roseateles depolymerans: RD2015_640
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Entry
RD2015_640 CDS
T04166
Name
(GenBank) DNA polymerase-like protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RD2015_640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdp03400
]
RD2015_640
Enzymes [BR:
rdp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
RD2015_640
DNA repair and recombination proteins [BR:
rdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RD2015_640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
MCCD1
Motif
Other DBs
NCBI-ProteinID:
ALV05137
UniProt:
A0A0U2TYB0
LinkDB
All DBs
Position
725803..726825
Genome browser
AA seq
340 aa
AA seq
DB search
MSWSDRQRRMLEAMGLKIWVPPSVGAAQAVPVGEASGADAADGETAGVRPGAVPRERVAA
QAPSAAVAVAERPRAPVQARAADRAAPGSAGGPPPAQAQTERAAGPTAERAADVLSRALP
AAVGDAVGATTQADRTGLSRQAIASLDWDGLRDAVSQCRACGLCETRKNTVFGVGHSQAH
WMIIGEAPGEQEDLQGEPFVGPAGKLLDNMLRALGLSRGEGPPEQQVFIANTLKCRPPRN
RNPDPAELAQCEPFLQRQIELIQPRIILAMGRFAVQQLLQSQEAIGRLRGRVHRYQGVPL
VVTYHPAYLLRNLPDKARAWEDLCLARQTLASGGGRPEAE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgagctggagtgaccgtcaacgccggatgctggaggccatggggctgaagatctgggtg
ccgccttccgtgggggcggcccaggcagtcccggtgggcgaggcgtcgggcgctgacgcg
gccgatggcgagacggccggcgtgcggccaggcgccgtgccgcgcgagcgggttgctgcc
caggccccgtcagccgccgtggccgtggccgagcggccgcgtgcgcccgtgcaggcgcgg
gcggccgatcgcgcggcgccaggctccgctggcggaccgccaccggcgcaagcgcagacg
gaacgcgcggcggggccgaccgccgagcgggcggccgatgtgctgtcccgcgccttgccc
gcggccgtgggggatgccgtcggtgcaaccacccaggccgaccgcaccggcctgtcccgc
caggccatcgccagcctcgactgggacggtctgcgcgacgccgtgtcgcagtgccgcgcc
tgcggtctgtgcgagacccgcaagaacaccgtcttcggcgtcggccattcgcaggcgcac
tggatgatcatcggcgaggcgcctggtgagcaggaggacctgcagggcgagccctttgtc
ggcccggccggcaagctgctggacaacatgctgcgcgccctgggcctgagccgtggcgaa
gggccgcccgagcagcaggtattcatcgccaacacgctcaagtgccgaccgccgcgcaac
cgcaatccggaccccgccgagctcgcgcagtgcgagcccttcctgcagcgccagatcgaa
ctgatccagccccgcatcatcctggccatgggccgcttcgcggtgcagcagctgctgcag
agccaggaggccattggacggttgcggggccgtgtccaccgctaccagggcgtgccgctg
gtggtcacctatcacccggcgtatctgctgcgcaatctgccggacaaggcccgggcctgg
gaagacctgtgcctggcgcgccagacgctggcgtccgggggcgggcgtccggaggctgaa
tga
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