Roseateles depolymerans: RD2015_79
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Entry
RD2015_79 CDS
T04166
Name
(GenBank) Transcriptional regulator, LysR family
KO
K13635
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
rdp
Roseateles depolymerans
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rdp03000
]
RD2015_79
Transcription factors [BR:
rdp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
RD2015_79
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
HTH_30
HTH_24
PBP_like_2
MarR_2
MarR
MerR-DNA-bind
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ALV04584
UniProt:
A0A0U3C6L0
LinkDB
All DBs
Position
91587..92534
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AA seq
315 aa
AA seq
DB search
MNFQQLRSVREAQRRGFNLTEVAQALHTSQPGVSRQIRELEDELGIDIFIRAGKRLTGLT
EPGRNVMPIVERLLREAENLRRAGEDFARADSGHLRIAATHSQARYALPPAVRDFRNSHP
EVSLQFQQGTPQQVARLLMDGEADIGIATEALAEHPELLTLPCYRWTHTVLVPHDHPLAR
ETSEGRPLTLEQLGRHPIITYESGYTGRSHIDQAFAAAGVDLNVVLVAMDADVIKTYVEL
GLGVGIVAAIAYDEERDRQLRAIDARHLFADNLTRLAVRRDAYLRDYVYAFIETFAPPLT
RELVEQARAHPGGSD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaattttcagcaattgcgttccgtccgtgaggcacagcgtcgtggcttcaatctcact
gaagtcgcgcaggcgctgcacacctcgcaacccggcgtcagccggcagattcgcgaactc
gaagacgaattgggcattgacatcttcattcgcgccggcaaacgtctgaccggattgacc
gagcccggccgcaatgtcatgcccattgtggagcgtttgctgcgcgaggcggagaatctg
cgccgcgccggcgaggacttcgcccgcgccgacagcggtcatctgcgcattgccgccacc
cacagtcaggcgcgttatgcattgccgccggccgtgcgtgatttccgcaattcacatccg
gaagtgagcctgcaattccagcagggcacgccgcaacaggtggcgcgtctgctgatggac
ggcgaggcagacatcggcattgccaccgaagcattggccgagcatccggaactgctgacg
ctgccttgctaccggtggacgcataccgtgctggtgccgcacgatcatcccctggcccgc
gaaacgtccgagggacgcccgctgacgctggagcaactcggccggcatccgatcatcacc
tatgaaagcggctacaccggccgcagccacattgaccaggcctttgccgcggctggtgtc
gacctcaatgtggtgctggtggccatggatgccgacgtgatcaagacctatgtcgagctg
ggattgggcgtgggcatcgtcgccgcaatcgcctatgacgaggagcgtgaccgccagttg
cgcgcgatcgatgcccgccatctgttcgccgacaacctgacccgcctggcggtgcggcgg
gacgcctacctgcgggactatgtctacgccttcatcgagaccttcgccccgccgctcacc
cgcgagctggtggagcaggcacgcgcccatccgggcggctcggactga
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