Roseateles depolymerans: RD2015_897
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Entry
RD2015_897 CDS
T04166
Name
(GenBank) Fumarate hydratase class II
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp00020
Citrate cycle (TCA cycle)
rdp00620
Pyruvate metabolism
rdp00720
Other carbon fixation pathways
rdp01100
Metabolic pathways
rdp01110
Biosynthesis of secondary metabolites
rdp01120
Microbial metabolism in diverse environments
rdp01200
Carbon metabolism
Module
rdp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rdp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RD2015_897
00620 Pyruvate metabolism
RD2015_897
09102 Energy metabolism
00720 Other carbon fixation pathways
RD2015_897
Enzymes [BR:
rdp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
RD2015_897
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
GcnA_N
Motif
Other DBs
NCBI-ProteinID:
ALV05393
UniProt:
A0A0U2TYZ7
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All DBs
Position
complement(1010722..1012110)
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AA seq
462 aa
AA seq
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MKSATRIERDSMGEIDVPVDALYGAQTQRAVNNFAISRQPMPERFVRALLQQKAAAARAN
LSLGQLPEDIAHAIDRASAQLLQAPDLMSHFPVEVFQTGSGTSSNMNANEVLATLATRLL
GNNTTVSPNDHVNAGQSSNDSIPTVLHISAAQTLQGELLPALDHLVQVLKDKIASDGHHV
KTGRTHLMDAMPLRLGQELGGWMAQVDARRTQLRALLPTVCELAQGGTAVGTGINAHPEF
AQRFCEELSGLTGLTFRPAPDFFAALSAQDTAVALSGALKGVAVTLMKIANDLRWMNSGP
LAGLAEIELHALQPGSSIMPGKVNPVIPEAVTMVCAQVMGHDAAITVAGQSGNFQLNVML
PLIAHNLLDSLALLATASRALADQAIQDFRVNTSRLQEALSRNPILVTALNREIGYLKAA
AIAKRAYAENRPILDVAAEMTEIDRSTLQQMLDPSKLTDGGL
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccgccacccgcatcgaacgtgacagcatgggcgagatcgacgtgcccgtggac
gccctgtatggcgcccagacacagcgagcggtcaacaatttcgccatcagccgccagccg
atgcccgagcgcttcgtgcgcgccctgctgcagcaaaaggccgccgcggcccgggccaac
ctgagcctggggcagttgcccgaagacatcgcgcatgccatcgaccgggcgagcgcgcag
ttgctgcaggcgcccgacctgatgagccacttcccggtggaagtgttccagaccggctcg
ggcaccagcagcaacatgaatgccaacgaggtgctggccaccctggcgacccgcctgctg
ggcaacaacacgaccgtcagccccaatgaccatgtgaatgcgggccagagcagcaacgac
agcatccctacggtgctgcacatcagcgcggcgcagaccctgcaaggcgagctgctgccc
gcgctggaccatctggtgcaagtgctcaaggacaagatcgccagcgacggccaccatgtg
aagaccggccgcacccacctgatggatgcgatgccgctgcgcctgggccaggagctgggc
ggctggatggcgcaggtcgacgcgcgccgcacccagttgcgcgccctgctgcccacggtc
tgtgagctggcccagggcggcaccgcggtgggcaccggcatcaatgcccatcccgaattc
gcgcagcgcttctgcgaggaactgtccggactgaccggcctgaccttccgcccagcgccg
gacttcttcgccgcactgtcggcgcaggacacggccgtggcgctgtcgggtgcgctcaag
ggcgtggcggtgacgctgatgaagatcgccaacgacctgcgctggatgaattcgggtccg
ctggcgggcctcgcggaaatcgagctgcatgcgctgcaacccggctccagcatcatgccg
ggcaaggtcaacccggtgatcccggaggccgtgaccatggtgtgcgcccaggtcatgggc
cacgacgcggccatcaccgtggcggggcagtcgggcaacttccagctgaatgtgatgctg
ccgctgattgcccacaacctgctggacagcctggccttgctggccactgcgtcgcgggcg
ctggcggatcaggccatccaggatttccgggtgaacaccagccgcctgcaggaggcactg
tcgcgcaacccgatcctggtgacggcgctgaaccgggagatcggttacctgaaggcggcg
gccattgccaagcgcgcctatgccgagaaccgtccgatcctggacgtggcagcggagatg
accgagatcgaccgcagcacacttcagcagatgctggatccttccaagctcaccgatggc
ggactctga
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