Rhodococcus erythropolis BG43: XU06_02680
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Entry
XU06_02680 CDS
T03842
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
reb
Rhodococcus erythropolis BG43
Pathway
reb03030
DNA replication
reb03430
Mismatch repair
reb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XU06_02680
03430 Mismatch repair
XU06_02680
03440 Homologous recombination
XU06_02680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
reb03032
]
XU06_02680
03400 DNA repair and recombination proteins [BR:
reb03400
]
XU06_02680
Enzymes [BR:
reb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XU06_02680
DNA replication proteins [BR:
reb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XU06_02680
DNA repair and recombination proteins [BR:
reb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XU06_02680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_22
PAZ_4
Sublancin
Motif
Other DBs
NCBI-ProteinID:
AKD95822
LinkDB
All DBs
Position
579399..580628
Genome browser
AA seq
409 aa
AA seq
DB search
MSTEVAERGVFGRLVGQHDVEQSLRDAALSARGDSSGSEMTHAWLFTGPPGSGRSVAALC
FAAALQCTSDGAPGCGECHACTTTMGGTHGDVRRIIPDGLSISVKGMREIVNIASRRPTT
GRWQVIVVEDADRLTEGAANALLKVVEEPPDRTVILLCAPTTDPEDMSVTLRSRCRHMPL
VTPSVESIAQVLIDRDGLDPERARIAASISGGHVGRARRLATDESARDERQRSLRLAADA
IGASTAYKAAENLVKSIEADTKAFYAELKEQELEELKVSLGGGGTGKGTAGTLRGSAGLI
KDLEARQKSRDTRARRDLLDRTLIDLAGMYRDALSYSLGSTSTATHPDMGRQAAELAART
SPEGLLKCIEAVLECREAVDFNVKLQWALDAMVASIGAAFRPPFSRSGG
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgaagtggccgagcgaggtgtgttcggtcggctggtgggtcagcacgacgtc
gagcagagcctgcgtgatgctgcgctgtcggctcgtggcgattccagcggctcggagatg
acccacgcgtggctcttcaccgggccacccggctctggtcgttcggttgctgctctctgc
ttcgccgcagccctgcaatgcacctccgacggtgcaccagggtgcggtgagtgtcatgcg
tgtacgacgacgatgggtggaacccacggtgacgtacgacggatcatccccgacggcctg
agcatcagcgtcaaaggcatgcgcgagatagtcaacatcgcttcgcgtcggccgacgacg
gggcggtggcaggtcatcgtggtcgaggatgccgatcgtttgaccgaaggcgcagccaac
gccctgctgaaggttgtcgaggagccaccggaccgcacggtcatcctgctctgcgcgccg
acgaccgatccggaagacatgtctgtcaccctccgttcgcggtgtaggcacatgccgttg
gtgacgccgtccgtcgaatcgatcgcccaggtactgatcgaccgcgacgggctggatccg
gagcgagcgagaatcgccgcatcgatcagcggcggacatgtcggtcgggcgcggcgcctc
gccactgacgagagcgcgcgggacgagcgtcagcgttcgcttcggctagccgcagacgcg
atcggtgcttcgacggcgtacaaggccgcagagaacttggtgaagtcgatcgaggccgac
accaaggcgttctacgccgaactcaaggaacaggaactcgaggagctcaaggtctccttg
ggtggtggtggaaccggcaagggaacagccgggactctgcgcggatcggctggtctgatc
aaggacctcgaagcgcgtcagaaatcgcgcgacacccgggcccgccgcgatcttctcgac
cggacgctgatcgacctggccggcatgtaccgggacgcgctttcctattcgctggggtcg
acgtcgacggcgacccatcccgacatgggtcggcaggccgccgagttggctgcacgaacg
tccccggaggggttgctcaagtgcatcgaagcggtgctcgaatgccgcgaggccgtcgac
ttcaacgtcaagttgcagtgggcgctcgatgcgatggttgcctccatcggagccgctttc
cgacccccgttttcgcgatccgggggttga
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