KEGG   Rhodococcus erythropolis BG43: XU06_03885
Entry
XU06_03885        CDS       T03842                                 
Name
(GenBank) pyridine nucleotide-disulfide oxidoreductase
  KO
K00529  3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
Organism
reb  Rhodococcus erythropolis BG43
Pathway
reb00071  Fatty acid degradation
reb00360  Phenylalanine metabolism
reb00362  Benzoate degradation
reb01100  Metabolic pathways
reb01120  Microbial metabolism in diverse environments
reb01220  Degradation of aromatic compounds
Module
reb_M00545  Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:reb00001]
 09100 Metabolism
  09103 Lipid metabolism
   00071 Fatty acid degradation
    XU06_03885
  09105 Amino acid metabolism
   00360 Phenylalanine metabolism
    XU06_03885
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    XU06_03885
Enzymes [BR:reb01000]
 1. Oxidoreductases
  1.18  Acting on iron-sulfur proteins as donors
   1.18.1  With NAD+ or NADP+ as acceptor
    1.18.1.3  ferredoxin---NAD+ reductase
     XU06_03885
SSDB
Motif
Pfam: Pyr_redox_2 Reductase_C Pyr_redox NAD_binding_8 2-Hacid_dh_C Pyr_redox_3 AlaDh_PNT_C DAO Amino_oxidase AdoHcyase_NAD GIDA 3HCDH_N XdhC_C Rubredoxin_C GvpO Trp_halogenase DUF2631
Other DBs
NCBI-ProteinID: AKD96019
LinkDB
Position
842859..844115
AA seq 418 aa
MTAVSEPDTRTVVIVGTGIAGSGAAQALRKEGFGGSIILIGSETEEPYRRPALSKELLSG
KASIDRVRLRPPTFWTEQGIDLRIGVTVTRIDTDSRTIHLADGDGVDYDVLILATGGRSR
RLTAEDSERVHYLRDIADMRRLQSQLIEGSSLLVVGGGLIGSEVASTARDLGCSVQVLEA
QPLPLSRLLPPSIAEKIAALHNLAGVALQTGVDLEALTTGVDGVTARARDGREWTADLAV
VAIGSLPDTDMAAAAGIAVDNGISVDRYLRTSVIDVYAIGDVANVPNGFLGGMHRGEHWN
TAQDHAVAVAKTIVGKEEPFESVPWSWSNQFGRNIQVAGWPGADDTVIVRGDLDSYDFTA
ICMRDGNIVGAVSVGRPKDIRAVRTLIERSPDISADVLADSNRDLTELAAGLVALPVL
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgacagcggtcagtgaacccgacacccggaccgtggtgatcgtgggcacgggcatcgcc
ggttccggtgctgcgcaggccctacgcaaggaagggttcggcggcagcatcatcctgatc
ggctccgaaacggaggagccgtaccgacgtccggcgctgtcgaaggaactactgtccggg
aaagcgtcgatcgatcgggttcggttgcgaccgccgactttctggaccgagcagggtatc
gaccttcggatcggcgtgactgtcacgagaatcgacacagattcccgcaccatacattta
gccgacggtgacggcgtcgactacgacgttctgattcttgccacgggtggacggtcccga
cggttgaccgcggaagattctgagcgcgttcactatcttcgggatatcgcagacatgcga
cgcttgcaatcccagctgatcgaaggatcctcgctactggtggtcggcggtggcttgatc
ggatcggaggtggcatcaacggcacgtgacttgggttgcagtgtgcaggttctcgaagcg
caaccgctgcccctgtccaggctgcttccaccgtcgatagcggagaagatcgccgcgctg
cacaacttggccggcgtcgccttgcagacgggggtcgacctcgaggcgctgacgacaggt
gtcgacggtgtcaccgcacgtgcgcgtgacgggcgtgagtggactgcggacttggccgtc
gtcgcaatcggatccttgcccgataccgatatggctgctgctgcgggtattgcggtggac
aacgggatttcggtagaccgatacctccggacctccgtcattgatgtgtacgcgatcggc
gatgtggccaacgtgcccaacggttttctcggcggcatgcaccgtggtgagcactggaac
actgcgcaggaccacgcagttgcagttgccaagaccatcgtcgggaaggaagaacccttc
gaatccgtcccatggagttggtcgaaccaattcggccgcaacattcaagtagctggttgg
ccaggcgcggacgacaccgtgattgttcgaggagacttggactcctatgacttcactgcg
atctgcatgcgcgacggaaatatcgtcggtgctgtgagcgtgggccggccgaaggacatt
cgcgccgtccgaacccttatcgaacgctccccggacatcagcgccgacgtactcgccgat
tcgaacagggatctgaccgaacttgcggcgggtcttgtcgccttaccggtgctctga

KEGG   Rhodococcus erythropolis BG43: XU06_17870
Entry
XU06_17870        CDS       T03842                                 
Name
(GenBank) pyridine nucleotide-disulfide oxidoreductase
  KO
K00529  3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
Organism
reb  Rhodococcus erythropolis BG43
Pathway
reb00071  Fatty acid degradation
reb00360  Phenylalanine metabolism
reb00362  Benzoate degradation
reb01100  Metabolic pathways
reb01120  Microbial metabolism in diverse environments
reb01220  Degradation of aromatic compounds
Module
reb_M00545  Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:reb00001]
 09100 Metabolism
  09103 Lipid metabolism
   00071 Fatty acid degradation
    XU06_17870
  09105 Amino acid metabolism
   00360 Phenylalanine metabolism
    XU06_17870
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    XU06_17870
Enzymes [BR:reb01000]
 1. Oxidoreductases
  1.18  Acting on iron-sulfur proteins as donors
   1.18.1  With NAD+ or NADP+ as acceptor
    1.18.1.3  ferredoxin---NAD+ reductase
     XU06_17870
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox Reductase_C DAO Pyr_redox_3 HI0933_like NAD_binding_8 Lycopene_cycl Amino_oxidase NAD_binding_9 GIDA 2-Hacid_dh_C AlaDh_PNT_C Lys_Orn_oxgnase 3HCDH_N
Other DBs
NCBI-ProteinID: AKD98362
UniProt: A0A0E3VCM7
LinkDB
Position
3907573..3908808
AA seq 411 aa
MSTNRRFVIVGGGLAGAKIAEALRDRDFDGEITVLSEEDHLPYERPPLSKEFFAGKKTLP
EFTVHDGEWFRDHHIDLRPGTTATAIDPAAHTVSLPDGSTISYDKLALATGSRSRRLDIP
GSDAEGVHYVRTVDQAAALLRTLAADKKLVVIGAGWIGLEIAASARGFDVDVTVLEHAGL
PLESTLGPEMGEVFAALHRQNGVDLRTGTDVSAISVDGDHAAGVTLSDGTVIPADAVLIA
VGALPNTELASEAGIDVDNGVLVDAGLQSSDPDVVAVGDIAAAQHPILNARIRVEHWANA
LNQPETAADTMLGRPAEYVRMPYFFTDQYDLGMEYVGHAPHGGYSRVVTRGDVDKREFLA
FWLDSANKVLAGMNVNIWDAGDAIKELVASSRPVDPERLADPEIPLAEVSA
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgagcaccaaccggagattcgtgatcgtcggcggcgggctcgcgggcgcaaagatcgca
gaagccctgcgtgacagagatttcgacggtgagatcaccgtattgagcgaagaagaccac
cttccgtacgagcggccgccgctgtcgaaagagttcttcgcaggcaagaagacactcccc
gaattcaccgtccacgacggcgagtggttccgcgaccatcacatcgatcttcgtccggga
acgacggcaacggccatcgaccccgctgcgcacaccgtgtcacttccggacggttccacg
atcagctacgacaagctcgccttggccaccggctcacgttcgcggcgcctcgacatcccg
gggtccgacgccgagggcgttcactacgtgcgaacagtcgatcaagccgctgcgctactg
cgcaccctggccgccgacaagaagctcgtcgtgatcggtgccggctggatcggtctcgaa
attgccgcgtcggctcgcggtttcgacgtcgatgtcaccgtgctcgagcatgccggcctt
ccgctcgaatcgaccctgggcccggaaatgggtgaggtcttcgccgctctgcaccgccag
aacggcgtcgacttgcgcactggcacggacgtcagcgcaatctctgtcgacggcgatcac
gccgccggcgtcactttgagcgacggcaccgtgattccggccgacgccgtgttgattgct
gtcggcgcgttgccgaacaccgagttggcgtcggaggcgggtatcgacgtcgacaacgga
gttctcgtcgacgccggtctgcagagcagcgaccccgacgtcgttgcagtaggcgacatc
gcggccgcacagcatccgattctgaatgcacgaattcgggtggagcactgggcaaacgca
ctcaaccaacccgagacggccgcagacaccatgttgggtcggcccgccgagtacgtgcgc
atgccgtatttcttcaccgatcagtacgacctcggaatggaatacgtgggtcacgcgccg
cacggcggctactcccgtgtcgtcactcgcggcgatgtcgacaagcgcgagttcctggcc
ttctggctcgattccgcgaacaaggtgctcgccggcatgaacgtgaacatctgggatgcc
ggtgacgccatcaaggaattggtcgcctcttcgcgtcccgtcgatccggaacggctggcc
gatccggagattccgctggcagaagtgtccgcttga

KEGG   Rhodococcus erythropolis BG43: XU06_30715
Entry
XU06_30715        CDS       T03842                                 
Name
(GenBank) 2Fe-2S ferredoxin
  KO
K04755  ferredoxin, 2Fe-2S
Organism
reb  Rhodococcus erythropolis BG43
Pathway
reb00362  Benzoate degradation
reb01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:reb00001]
 09100 Metabolism
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    XU06_30715
SSDB
Motif
Pfam: Fer2
Other DBs
NCBI-ProteinID: AKE01306
UniProt: A0A0E4AFC7
LinkDB
Position
pRLLBG43:61897..62217
AA seq 106 aa
MAVVTFVSHDGKKHEVPFQEGQSLMQVATNNAVPGIDGDCGGEAACGTCHVIVDPQWSEE
VGLSGSDEEEMLAMNPERQPTSRLSCQIPVSEAWDGLTVLMPEFQM
NT seq 321 nt   +upstreamnt  +downstreamnt
atggcagttgtcacctttgtctcacacgacggcaagaagcacgaggtccctttccaagaa
ggacagtcgctgatgcaggtcgcgaccaacaatgcagtgcccggcatcgacggcgactgc
ggaggcgaggccgcgtgcggcacctgccatgtgatcgtcgatccgcagtggtccgaggag
gtgggcctctccggctccgacgaggaggagatgctcgcgatgaaccctgagcgtcaaccg
acctctcgactgtcctgccagattccggtctccgaggcgtgggacggcctgaccgtccta
atgcctgagtttcagatgtga

KEGG   Rhodococcus erythropolis BG43: XU06_30725
Entry
XU06_30725        CDS       T03842                                 
Name
(GenBank) pyridine nucleotide-disulfide oxidoreductase
  KO
K00529  3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
Organism
reb  Rhodococcus erythropolis BG43
Pathway
reb00071  Fatty acid degradation
reb00360  Phenylalanine metabolism
reb00362  Benzoate degradation
reb01100  Metabolic pathways
reb01120  Microbial metabolism in diverse environments
reb01220  Degradation of aromatic compounds
Module
reb_M00545  Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:reb00001]
 09100 Metabolism
  09103 Lipid metabolism
   00071 Fatty acid degradation
    XU06_30725
  09105 Amino acid metabolism
   00360 Phenylalanine metabolism
    XU06_30725
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    XU06_30725
Enzymes [BR:reb01000]
 1. Oxidoreductases
  1.18  Acting on iron-sulfur proteins as donors
   1.18.1  With NAD+ or NADP+ as acceptor
    1.18.1.3  ferredoxin---NAD+ reductase
     XU06_30725
SSDB
Motif
Pfam: Pyr_redox_2 Reductase_C Pyr_redox Pyr_redox_3 NAD_binding_8 DAO Lycopene_cycl TrkA_N AlaDh_PNT_C NAD_binding_7 FAD_binding_3 MDHAR3-like_C GIDA 2-Hacid_dh_C HI0933_like UDPG_MGDP_dh_N XdhC_C Trp_halogenase AdoHcyase_NAD 3HCDH_N
Other DBs
NCBI-ProteinID: AKE01308
UniProt: A0A0E3VEB6
LinkDB
Position
pRLLBG43:63627..64829
AA seq 400 aa
MTLHRALVVGASHAGAQLAASLRQEGWTGEIVLIGDESTLPYQRPPLSKAYLAGKSTLDE
LAIRNADFYSKQGIQVLNATVEAIDRSGGHLSLSTGGALAYDQLALCTGARPRRLPTPGA
NLAGVHYLRTAADVEMIRVAAHAGRRAVIIGGGYIGLETAASLRALGLEVTVLEATGRVL
ERVTAPEVSAFFDRIHRQEGVKIRTGVLVEVLSGEDRVREVVLSGGESIPADLVIVGIGV
EPNTDLAAAAGLVIDNGVVIDDQARTSDPDIVAAGDCASHSMARYSRPLRLESVPSAHEQ
AKVAAATVCGKSKKIAALPWFWSDQYDLKLQIAGLNTGYDEVILSGDPTRDRDFTCFYLR
EGELIGADCINRPRDFMFSKRVITQQLPIDRTELALASSA
NT seq 1203 nt   +upstreamnt  +downstreamnt
atgaccttacatcgggccctcgtcgtcggggccagccatgccggagcccaactcgcggcc
agtcttcgacaggaagggtggaccggcgagatcgttctcatcggcgatgagtcgacgttg
ccctaccaacgccctcctctgtcgaaggcgtacctggccgggaagagcacactcgacgag
cttgcgatccgcaatgccgatttctatagcaagcagggaatccaagtcctgaatgcgacg
gtggaggcgatcgaccgctcgggtggtcatctctcactgagtaccggcggcgcactagct
tacgaccagcttgcgctgtgcactggcgcccgccctcggcgactccccaccccgggagcc
aacttggccggagtccactacttacgcacagccgcagacgtcgagatgatccgagtggcc
gcccacgcaggacgtcgggcagtgatcatcggcggcggttacatcggactggagacggct
gcctcgttgcgtgcactggggctggaggtcaccgtgctcgaggcgactgggcgcgtcctt
gagcgggtcactgcccccgaagtatcagcgttcttcgaccgtattcaccggcaggagggc
gtgaaaatccggacgggtgtgctggtcgaggttctgtccggcgaggacagggtccgtgaa
gtagttctgtccggtggcgagtcaattcccgctgacctcgtcattgtcggcatcggcgtt
gagccgaacaccgatcttgccgccgccgcaggtctggtcattgataacggcgtcgtgatc
gacgaccaggcccggaccagcgaccccgacatcgtggccgccggggattgcgcaagccac
agcatggctcgctacagccgccctctacgcctggagtctgtgccgagcgcgcacgagcaa
gccaaggtcgctgccgcgacggtgtgtgggaagtccaagaagatagcggcgcttccatgg
ttctggtcggatcaatatgatctcaagctccagatcgccggtctgaacaccggttacgac
gaagtcatcctcagcggagacccgacccgagaccgcgacttcacctgcttctacctccgt
gagggagagcttattggcgccgactgcatcaaccgcccccgtgacttcatgttcagcaag
cgggtaatcacgcagcaactccccatcgaccgaactgaactggcgcttgccagctccgcc
tga

KEGG   Rhodococcus erythropolis BG43: XU06_31870
Entry
XU06_31870        CDS       T03842                                 
Name
(GenBank) pyridine nucleotide-disulfide oxidoreductase
  KO
K00529  3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
Organism
reb  Rhodococcus erythropolis BG43
Pathway
reb00071  Fatty acid degradation
reb00360  Phenylalanine metabolism
reb00362  Benzoate degradation
reb01100  Metabolic pathways
reb01120  Microbial metabolism in diverse environments
reb01220  Degradation of aromatic compounds
Module
reb_M00545  Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:reb00001]
 09100 Metabolism
  09103 Lipid metabolism
   00071 Fatty acid degradation
    XU06_31870
  09105 Amino acid metabolism
   00360 Phenylalanine metabolism
    XU06_31870
  09111 Xenobiotics biodegradation and metabolism
   00362 Benzoate degradation
    XU06_31870
Enzymes [BR:reb01000]
 1. Oxidoreductases
  1.18  Acting on iron-sulfur proteins as donors
   1.18.1  With NAD+ or NADP+ as acceptor
    1.18.1.3  ferredoxin---NAD+ reductase
     XU06_31870
SSDB
Motif
Pfam: Pyr_redox_2 Reductase_C Pyr_redox Pyr_redox_3 DAO NAD_binding_8 MDHAR3-like_C HI0933_like Amino_oxidase 3HCDH_N AlaDh_PNT_C NAD_binding_9
Other DBs
NCBI-ProteinID: AKE01515
LinkDB
Position
pRSLBG43:complement(22436..23653)
AA seq 405 aa
MRQTIAIVGANLAGGHAARTLRAEGFDGEIQLIGSEPHPPYERPVLSKEVLLRQCEPERA
YLQSSDVWSQQDITLRLGTTVQRIRPTERELELSDGGAIRADKVLLCTGGRVRRLDIPGA
DLEGVEYLRTIEDSIAIRERLRPGAPVVVIGGGFIGAEVAACARESGCVVTLLEQGDMPL
SRVLGREIGLALTRVHREEGVTVATNTSVARIGGGKSVTHVVTTDGDRIEATLVVIGVGI
DPAVELADQAGLDVDNGIIVDEFCQTSNPSIYAAGDVANHPNGILGERVRLEQWQNANNQ
GAAAARSILGRQEKYCEVPWFWSDQFDVSVQMVGRPSAADAIVYRGDSESRSFSAFFVRN
GALRGAVGVNRPRDVKRTTAYIATGQIVDSAKLADESVDLRTIGS
NT seq 1218 nt   +upstreamnt  +downstreamnt
atgcgacagacgattgcaattgtcggcgccaatctggctggtggacatgccgcccgaacc
cttcgcgccgaaggtttcgacggagaaatccagctgatcggctctgagccgcatccccct
tacgaacgtccggtgttgtcgaaagaagttcttctgcggcaatgcgagcccgaacgcgcc
taccttcagtcgagcgatgtgtggtctcaacaggacattacgttgcggttgggtacgact
gtgcaacgcatccgacccacggaacgtgaacttgagttgtccgatggcggcgctatccgc
gcggacaaggttctgctgtgcaccggcgggagggtgcggcgactagatatccccggcgcc
gacttggagggagttgagtatctcaggacgatcgaagattccattgcaattcgggaacga
ttacgtccaggcgcgcccgtggtcgtaattggagggggattcatcggcgccgaagtggct
gcctgcgcccgcgaatccggctgcgttgtaacgcttctcgagcagggtgacatgcctctt
tcccgagttctgggtcgcgagatcggtctcgcccttacccgcgtccatcgcgaggaaggc
gtcaccgtcgcgactaatacatcggtagcacgcattggaggtggtaagagcgttactcac
gttgtgacgacggacggagatcgcatcgaggccaccctcgtggtaatcggagttggtatc
gatccggctgtggaactcgcggaccaggcgggtctcgacgtcgacaatggcatcatcgtc
gacgagttctgccagacatccaacccaagcatttacgccgcgggggacgtcgccaatcac
cccaacggcatcctcggagaacgcgttaggctcgaacagtggcaaaacgcaaataaccaa
ggggccgccgctgctcggtcaatcctgggcaggcaagagaaatactgcgaagtcccctgg
ttctggtcggaccagttcgatgtcagtgttcagatggttggtcgtccctcggcggcagac
gccattgtgtatcgcggtgactccgagtccaggtcgttcagtgcattcttcgtccgcaac
ggagccctacgaggtgcggtgggggtgaacaggccacgggatgtcaagcgcacgacggcc
tatatcgccacgggccagatcgtggactcggcgaagctcgcggatgagagcgtcgatttg
cgaacaatcggctcgtga

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