Rhodococcus erythropolis BG43: XU06_06225
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Entry
XU06_06225 CDS
T03842
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
reb
Rhodococcus erythropolis BG43
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
reb03021
]
XU06_06225
Transcription machinery [BR:
reb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XU06_06225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_3
MarR
HTH_Crp_2
HTH_24
DUF7343
MarR_2
HTH_23
Vac_Fusion
KORA
HTH_31
Sigma70_ECF
HTH_37
DUF134
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AKE00464
UniProt:
A0A5N5EA75
LinkDB
All DBs
Position
complement(1354122..1354853)
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AA seq
243 aa
AA seq
DB search
MFVSMASLPPDDPTREKITNSIIELCLPLATHVARRYQGRGQPFEDLEQVARVGLVQAVQ
RFDVDKGSDFLSFAVPTVMGEVRKHFRDHGWSVRVPRSLQERHLALNRALTSLSQTLGRA
PTVAELATELDIEPDEVEQGLTAGNSYRTTPLDTASAGDGSGLTLIDTLGQYDEAISRID
NHETLRPALLALPERERTIVVLRFFGHLTQSQIAEKIGISQMHVSRILTQTLKQLRTEMG
EIF
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgtctcgatggcgtcgcttccgccggatgatccgacccgagaaaagatcaccaac
tcgatcatcgaactgtgcctaccgctcgccacccacgttgcacgtcgctaccaggggcgc
ggccagcctttcgaggacttggaacaagttgcgcgcgtggggttggtacaggctgtgcag
cgattcgacgtagacaaaggatcggatttcctgtcgttcgcagtccccaccgtaatgggc
gaggtacgcaagcattttcgcgatcacggctggtccgtacgcgtacctcgcagccttcag
gaacgacatcttgccctcaaccgggcgctcacgtcgttgtcgcagacgctcggccgtgca
ccgacggtagcggaacttgcgacggagctcgacatcgagccggacgaggtcgaacagggg
ttgaccgccggaaattcgtatcgaaccacaccgctcgacaccgcgtcagccggcgacggg
agcggactgactctgatcgatactttgggacagtacgacgaagcgatcagtcggatcgac
aatcacgaaaccctgcgacccgcgctccttgcactaccggagcgcgagcgcacgatcgtg
gttctcagattcttcggtcatctcacccagtcccagattgccgaaaagatcggcatctct
cagatgcatgtatccagaatcctcactcagacactgaagcagctgcgcaccgagatgggt
gaaatcttctga
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