Rhodococcus erythropolis BG43: XU06_13320
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Entry
XU06_13320 CDS
T03842
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
reb
Rhodococcus erythropolis BG43
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
reb03016
]
XU06_13320
Enzymes [BR:
reb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
XU06_13320
Transfer RNA biogenesis [BR:
reb03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
XU06_13320
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AKD97603
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All DBs
Position
complement(2883622..2884911)
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AA seq
429 aa
AA seq
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MSEVTDDATEPTSDVVPLLVPRDGVPDVITTAAGVADAAAALASGHGPLAVDAERASGFR
YSARAYLIQLRREGAGSFLLDPIPTAQDLQPLAEAINPLQWVLHSADQDLPGLAELGLTP
AELFDTELAGRLAGFERVGLAAIVERTLRVELRKGHGAADWSTRPLPDAWLNYAALDVEV
LLELRDAMEAELESQGKLEWAKEEFEYIRLAGPPKPKPDRWRRTSHITSLKTTRQLAAVR
ALWQAREDLARKRDVSPSRVLPDSAIIDAALKDPQSLDALRSLPVFGGPRQRRYSRVWMD
ALEAARRLPDSELPPKTPPIVGPPAAGRWARQDPAAADRLTAARAALSDLSKEVSVPVEN
LLQPDLVRRLCWDWKLEPDSDIAEVETAIETKLTSGGARGWQRTLTVPVLAEALNSVVPA
EPEAEEPES
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagtcaccgatgatgcaaccgagcccacctccgacgtagttccgctgctcgtt
ccgcgtgacggagttccggacgtcatcaccactgccgccggtgtcgccgacgccgcggcc
gcgctggcctccggccacggcccgctcgccgtggacgccgagcgagcatccggattccgt
tattcggcacgggcgtacctgatccagctccgacgcgaaggagcgggatcgttcctgctc
gacccgatcccgacagcgcaggacctgcagccgttggccgaggcgatcaatccgttgcaa
tgggtgctgcactcggccgatcaggatctccccggcctcgccgaactgggcctgacaccg
gccgagctgttcgacaccgaactggccggtcgactggccgggttcgaacgagtcggactc
gccgcgatagtggaacgaaccctgcgggtggaacttcgcaagggtcacggggccgcggac
tggtcgacacgtccgctgccggacgcctggttgaactacgccgccctcgacgtcgaagtg
cttctcgaactgcgcgacgccatggaagccgaactcgaatcccagggcaagctcgagtgg
gcgaaggaggagttcgagtacatccgtctggccggcccgcccaagcccaagcccgaccgt
tggcgtcgtacatcgcacatcacctcgctcaagaccactcggcagttggcggcagtacgg
gcgctgtggcaggcgcgtgaggatctcgcacgcaagcgcgacgtgtcgccgagccgggtt
ctccctgactccgccatcatcgatgccgccctcaaagatcctcagtcgctggatgcgctc
cgttcgcttcccgtgttcggcggaccacgtcaacgccggtattcgcgtgtctggatggac
gcactggaagctgcgcgcaggctcccggacagcgagcttccgccgaagaccccgccgatc
gtcggaccccctgccgccggccgctgggctcgccaggacccggcggcggccgaccgactg
acggcggctcgggccgcactgtcggacctgagcaaggaagtgtcggtgcccgtggagaat
ctgctccaacccgacctggtcaggcgcctgtgctgggactggaagttggaacccgactcc
gacatcgccgaggtcgagaccgcaatcgagaccaagctcacttccggtggcgcacgtggc
tggcaacgcactttgacggttcccgtcctcgccgaggcactgaactccgtggtcccggcc
gagcccgaagcggaagagcctgaatcctga
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