Rhodococcus erythropolis BG43: XU06_14245
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Entry
XU06_14245 CDS
T03842
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
reb
Rhodococcus erythropolis BG43
Pathway
reb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
XU06_14245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
reb03400
]
XU06_14245
DNA repair and recombination proteins [BR:
reb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
XU06_14245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
AKD97761
UniProt:
A0A0C3AA26
LinkDB
All DBs
Position
complement(3082097..3082945)
Genome browser
AA seq
282 aa
AA seq
DB search
MGGMRSIWKGSIAFGLVNVPVKVYSATEDHDIRFHQVHAKDGGRIKYNRVCSECGNTVQF
ADIDKAYDSEDGSRVILSDEDFNKLPAAEKHEIPVLEFVPNDQIDPILFEKSYFLEPDSA
SPKAYVLLSTVLTESDRTALVHFTLRQKTRLAAMRARDGVLVIQTLLWPDEVRAAEFPSL
DDVEKPKAKELKMAQTLVESMAGDFDPTEFTDDYQLQLRQLLDEMIENGGKKVIPAAEVD
QEGTDAEVVDLVAALQRSVDEAKSNASKAGSSKSTTPRKKRA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcatgcgctcgatttggaaaggctcgatagccttcggtctggtcaacgttccg
gtcaaggtgtactcggcgaccgaggaccacgacatccgatttcaccaggtccatgcaaaa
gacggtggccgcatcaagtacaaccgtgtgtgttccgagtgcggaaacacggttcagttc
gcggacatcgacaaggcgtacgactcggaagacggatcgcgcgtcatcttgagcgacgag
gacttcaacaaactcccggccgcggagaagcacgagattccggtgctggaattcgtgccg
aacgatcagatcgatccgatcttgttcgagaagagttacttcctcgaacccgattcggcg
tcgccgaaggcgtacgtcctgctttcgactgtgctcaccgagagtgatcgaacggcactg
gtgcatttcactctgcgacagaagacgcgcctggccgcgatgcgcgctcgcgacggcgtc
ctcgtgatccagacgttgctgtggcccgacgaagttcgcgcagcagagttcccttcactc
gacgacgtggagaagccgaaggccaaggaactgaagatggcgcagacgctcgtcgagagc
atggcgggcgatttcgatccgaccgagttcaccgacgactaccagctccaactgcggcag
ttgctcgacgagatgatcgagaacggcggcaagaaggtcatccccgccgccgaggtcgac
caagagggcaccgatgcagaggtggtcgacctcgttgccgcactgcagcgcagtgtggac
gaagcgaagtcgaacgcctccaaggccggctcgtcgaagtcgacgacgccgaggaagaaa
cgagcctga
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