Rhodococcus erythropolis BG43: XU06_15580
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Entry
XU06_15580 CDS
T03842
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
reb
Rhodococcus erythropolis BG43
Pathway
reb03030
DNA replication
reb03410
Base excision repair
reb03420
Nucleotide excision repair
reb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XU06_15580
03410 Base excision repair
XU06_15580
03420 Nucleotide excision repair
XU06_15580
03440 Homologous recombination
XU06_15580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
reb03032
]
XU06_15580
03400 DNA repair and recombination proteins [BR:
reb03400
]
XU06_15580
Enzymes [BR:
reb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XU06_15580
DNA replication proteins [BR:
reb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
XU06_15580
DNA repair and recombination proteins [BR:
reb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
XU06_15580
NER (nucleotide excision repair)
GGR (global genome repair) factors
XU06_15580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
baeRF_family2
DNA_pol_lambd_f
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AKD97991
LinkDB
All DBs
Position
complement(3393750..3396497)
Genome browser
AA seq
915 aa
AA seq
DB search
MSPATTTRSSTSTASAGTTGKADDRPLLMLLDGHSLAFRAFYALPAENFKTHSGQATNAV
YGFTSMLINLLRDEQPTHLAAAFDVSRQTFRADLFPEYKAQRAKAPDEFKGQIDITKDVL
GALGIPVMAEEGFEADDVIATLTTQAEALGYRVLVVTGDRDSLQLVTDNVTVLYPKKGVS
ELTRFTPTAVEEKYSLTPSQYPDFAALRGDPSDNLPGIPGVGEKTATKWIREYGDLQGLV
DNVDKVRGKVGDSLRENLANVLLNRQLTEMVRDVPLPYTPEQLVLAPWDREKIHALFDDL
EFKVLRDRLFATLSSSEPEAEEGFEVSGDALAPGAVAAWLDAHARTGERHGVTVLGTRTP
FAGDVTALAIAASDGECAYIAASTATPEDEAALGDWLADASQPKALHEAKWAIHALRGRG
WTLGGLTSDTALAAYLVRPGQRSFNLDDLSLRYLKRELRAETSGQEQLSLLDDTEQLDAE
AAETAMLSAQAVLDLAAALDTELESIESKSLLSDMELPLTIELAQIEATGIAVDSAHLHD
LQSRFASQVADAANSAYEVIDKQINLGSPKQLQVVLFEELDMPKTKKTKTGYTTDAEALQ
GLFDKTGHPFLEHLLAHRDATRMKVTVDGLLKAVAEDGRIHTTFNQTVAATGRLSSTDPN
LQNIPVRNDAGREIRDGFVVGQGFDVLLTADYSQIEMRIMAHVSGDEGLIEAFNTGEDLH
SFVGSRAFGVPIEEVTPELRRRVKAMSYGLAYGLSAYGLASQLKISTEEAKQQMDAYFAR
FGGVRDYLHAVVEQARKDGYTSTLYGRRRYLPDLNSDNRQRREVAERAALNAPIQGTAAD
IIKVAMINVQKALAEAGLKSRMLLQVHDELVLEVVASELEEVTALVKDKMATAIELSVPL
DVSVGTGRSWDSAAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
gtgagccccgcaaccacaactcggtccagcacgtccaccgcttcagccggcaccaccggc
aaggcggacgatcgccctcttctgatgcttctcgacgggcattcgttggcatttcgcgcc
ttctatgcgctgcctgcagagaacttcaagacacacagtgggcaggccaccaacgcggtg
tacggcttcacgtcgatgttgatcaaccttcttcgtgacgagcagcccacccacttggcc
gcggctttcgacgtgtcgcgtcagacgtttcgcgccgacctgttccccgaatacaaggcg
cagcgcgcgaaggctccggacgaattcaagggccagatcgacatcaccaaggacgttctc
ggcgcgctgggcatcccggtcatggccgaggaaggtttcgaggccgacgacgtgattgcc
acgttgaccacgcaggcggaggcgctcggataccgggttctcgtcgtgaccggcgaccgc
gactcgctgcagctggtgaccgacaacgtcactgtgctctacccgaagaagggtgtctcg
gagctcacccgattcacgccgacggccgtcgaggagaagtacagcctcactccgtcgcag
tatccggattttgctgccctgcgcggcgacccgagtgacaaccttcccggtatccccggc
gtcggcgagaaaaccgctaccaagtggatccgtgagtacggtgacctgcagggactggta
gacaacgtggacaaggtccgcggcaaggtgggcgactcactacgagagaacctcgcaaac
gtcctgctcaatcgtcagctcaccgagatggttcgcgacgtcccgttgccgtacacgccc
gagcagttggtgttggccccgtgggaccgcgagaagattcatgcgttgttcgacgatctc
gagttcaaggttctccgcgatcgactgttcgcgaccctgtcgtcgtccgagcccgaagca
gaggaagggttcgaggtcagcggcgatgcactcgccccgggtgcggttgccgcgtggctc
gatgcccacgcgcgaaccggtgagcgtcacggcgtcacagtgctcggaaccagaactccg
tttgccggcgacgtcactgcactcgcgatcgcggcctccgacggtgaatgtgcatacatc
gcggcgtcgacggcaacaccggaagacgaagcagctctcggtgattggctcgccgacgca
tcgcagccgaaggcgctgcacgaagccaagtgggcgatccacgctctgcgtgggcgtggt
tggacgctcggtggactgaccagcgacaccgctctggccgcatacctcgtccggccgggc
cagcgcagcttcaatctcgacgacctctcgctccgctacctcaagcgtgaactgcgcgcc
gaaacatccggccaggaacagctttcactgctcgacgacaccgaacagctcgatgccgaa
gcagccgagaccgcgatgctcagcgctcaggccgttctcgacttggcagctgcactggac
accgagttggagtcgatcgagtccaagtcgctcctctccgacatggaactgccgttgacg
atcgagctcgcacagatcgaggccaccggcatcgccgtcgacagcgcgcatctgcacgat
cttcagagccgtttcgcctcccaggtcgccgacgccgcaaactccgcgtacgaggtgatc
gacaagcagatcaacctgggttcgccgaagcagctgcaggtggtcctgttcgaagaactc
gacatgcccaagaccaagaagacgaagacgggctacaccaccgacgccgaggcgttgcag
ggtctgttcgacaagacaggacacccgttcctcgaacaccttctcgcgcaccgtgacgcg
acgcgtatgaaggtgaccgtcgacggtcttctcaaggccgtggccgaagacggacgcatt
cacacgacgttcaaccagacggttgccgcgaccggacgtctgtcgtcgaccgatccgaac
ttgcagaacatcccggtgcgaaacgacgcggggcgcgagattcgcgacggattcgtagtc
gggcaaggtttcgacgttctgctcactgccgactacagccagatcgaaatgcgcatcatg
gcgcacgtgtcaggcgacgagggactgatcgaggcattcaacaccggtgaggacctgcac
agctttgtcggctcgcgcgcattcggagttccgatcgaagaggtcactcctgaactgcgt
cgccgggtcaaggcgatgtcctacggtctggcctacgggctcagtgcctacggattggcg
tcgcagctgaagatttcgaccgaagaagcgaagcagcagatggatgcgtacttcgctcgt
ttcggcggcgtgcgggattacctccacgcggtggtcgagcaggcacgtaaggacggctac
acctcgacgctctacggtcgtcgtcgctacctgccggacctcaacagcgacaaccgtcag
cgtcgtgaggtggccgaacgggctgccctgaatgcgccgatccagggcaccgcagccgac
atcatcaaggtcgcgatgatcaatgttcagaaggctctcgccgaagccggattgaagtcg
cgcatgctgttgcaggtgcacgacgaattggtgctcgaagtggtcgcctccgagttggag
gaagtcaccgcactggtcaaggacaagatggccacagccattgagttgtcggtacccctg
gatgtttcggtgggaaccggtcgaagctgggacagcgcggctcactga
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