Rhodococcus erythropolis BG43: XU06_16385
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Entry
XU06_16385 CDS
T03842
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
reb
Rhodococcus erythropolis BG43
Pathway
reb03030
DNA replication
reb03430
Mismatch repair
reb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XU06_16385
03430 Mismatch repair
XU06_16385
03440 Homologous recombination
XU06_16385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
reb03032
]
XU06_16385
03400 DNA repair and recombination proteins [BR:
reb03400
]
XU06_16385
Enzymes [BR:
reb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XU06_16385
DNA replication proteins [BR:
reb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XU06_16385
DNA repair and recombination proteins [BR:
reb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XU06_16385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
AKE00742
LinkDB
All DBs
Position
complement(3601234..3604770)
Genome browser
AA seq
1178 aa
AA seq
DB search
MADSFVHLHNHTEYSMLDGAAKVGAMFEEAARLEMTAVGMTDHGNMYGASQFYNEAKSAG
IKPIIGIEAYIAPESRFNTKRVLWGDRSQKSDDVSGSGAYTHMTMVAENATGLRNLFKLS
SLASIEGQLGKWPRMDEELIAAHAEGIIATTGCPSGEIQTRLRLGHDREALEAAAKWQEI
WGPDNFFLELMDHGLSIERRVREGLLDIGKQLGIPPLATNDCHYVTKDAAENHEALLCIQ
TGKTLSDPTRFKFDGDGYYLKSAAEMRAIWDNEVPGACDNTVAIGERVQSYEDVWAFHDR
MPIFPVPEGHTQQTFLRAEVMRGLDRRFPSGPPQEYLARADYEIGVINEMGFPAYFLVVG
DLINHAKDVGIRVGPGRGSAAGSLVAYAMGITNIDPIPYGLLFERFLNPERVSMPDIDID
FDDRRRGEMVRYATDKWGNDKVAQVITFGTIKTKAAIKDSARVQFGKPGFAIADQITKAL
PPPIMAKDISVSGITDPKHERYKEAVEVRALIDSSPDVAKIYKTAVGLEGLIRNAGVHAC
AVIMSSEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDTLENIK
ANRGIDLDLDTLPMDDAATYELLARGDTLGVFQLDGGGMRELLKLMQPTGFGDIVAALAL
YRPGPMGVDAHISYAKRKNALEDVKPIHPELEEPLAEILSETYGLIIYQEQIMQLAQKVA
GYTLGQADLLRRAMGKKKLSELEKAYAGFRQGMLDNNFSEAAIKALWDTVLPFAGYAFNK
SHSAGYGLVSYWTAYLKANYPAEYMAGLLTSVGDDKDKSAIYLADCRKLGITVLPPDVNE
SRVDFATVGDDIRFGMGSVRNVGANVVASIIKARTEKSKFTDFSDYLGKIDAMACNKKVT
ESLIKAGAFDSLGHPRKGLMLVHADAIDSVMSTKKAEAIGQFDLFGGAEADESITSVFDV
KIPEEEWDSKHRLALEREMLGLYVSGHPLNGVEHILRQQSDTSIAAILEGGVQDGAQVTL
GGIIASVDRRVNKNGLTWCIVQLEDLVGGIEVLFFPQAYAVYGMDIAEDAIVLVKARVSI
RDDRMSLIGNDLAVPDISAIGVARPLSVSLPLRQCTKDKLSALKQVLTRHPGTSDVHVRL
IGGTEISLWKVDDVLRVEPSSALMGDLKALLGPSCLTV
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
gtggctgactcgttcgtacatcttcacaatcacaccgagtactcgatgctcgacggtgcg
gccaaggtcggcgccatgttcgaggaggccgctcgtctcgaaatgaccgctgtcggcatg
accgaccacggaaacatgtacggcgccagccagttctacaacgaggccaagagtgccggc
atcaagccgatcatcggcatcgaggcgtacatcgcacccgaatcccgcttcaacacaaag
cgagttctctggggagatcgcagccagaagtccgacgacgtctccggtagcggtgcgtac
acgcacatgacgatggtggccgagaacgccacggggctccgaaacctcttcaagctgtcc
tctctcgcgtcaatcgagggacagctcggcaagtggcctcgcatggacgaggaactcatc
gcggcgcacgccgagggcattatcgccaccaccggttgcccttcgggtgagattcagacg
cgtcttcgtctcggtcacgatcgcgaggctctcgaagctgccgcgaagtggcaggagatc
tggggaccggacaacttcttcctcgaattgatggatcacggtctctcgatcgagcgccgg
gtgcgcgagggtctgctcgacatcggcaagcaactcggtatcccgccgcttgccaccaac
gactgccactacgtcaccaaggacgccgccgagaaccacgaggcgctgctctgcatccag
accggcaagacgctgtccgaccccacgcgcttcaagttcgacggcgacggctactacctc
aagtccgctgccgagatgcgcgccatctgggacaacgaagtaccgggggcgtgcgacaac
accgtggccatcggcgagcgtgtgcagtcgtacgaggacgtgtgggcgttccacgaccgc
atgccgatcttcccggtcccggagggtcacacgcagcagaccttcctgcgcgccgaggtg
atgcgcggactcgatcgccgcttcccgagcggacctccgcaggagtacctcgcccgcgcc
gactacgagatcggcgtcatcaacgaaatgggcttcccggcctacttcctcgtggtcggc
gacctgatcaaccacgccaaggacgtcggaatccgcgtcgggcccggccgtggatcggca
gccggttcgttggtggcctacgcgatggggatcaccaacatcgaccccatcccgtacggg
ttgttgttcgagcgattcctcaaccccgagcgtgtgtccatgcccgatatcgatatcgac
ttcgatgatcgccgtcgcggcgagatggttcgctacgcgacggacaagtggggcaacgac
aaggtcgcccaggtcatcaccttcggcaccatcaagaccaaggctgccatcaaggactcg
gctcgcgtccagttcggcaagccgggctttgccatcgccgatcagatcaccaaggcgctc
ccgccgcccatcatggccaaggacatctcggtttccggtatcaccgacccgaagcacgag
cggtacaaggaggcagtcgaggttcgagcgctcatcgactccagcccggacgtcgcgaag
atctacaagaccgcggtgggtctggaagggctgatccgtaacgccggtgtgcacgcctgc
gcggtcatcatgtcgtccgaaccgctcaccgacgcaatcccggtctggaagcgcgcccag
gacggcgccatcatcaccggttgggactacccatcgtgtgaagctatcggcctgctcaag
atggacttcctcggtctgcgaaacctcacggttatcggcgatacgctcgagaacatcaaa
gccaaccgcggcatcgacctcgacctcgacactttgccgatggacgatgcggcaacatac
gaactgctcgcccgcggcgacactctcggtgtgttccagctcgacggcggcggtatgcgc
gagttgctgaaactgatgcagcccaccggattcggcgacatcgtcgccgcactggcgctg
tatcgaccggggccgatgggtgtggacgcccacatctcgtacgccaagcgcaagaacgcc
ttggaagacgtcaagccgattcaccccgagttggaggagccgctcgcggagatcctctcg
gagacgtacggcctgatcatctaccaggagcagatcatgcaactggcgcagaaggtggcc
ggttacaccctgggtcaggccgacttgctgcgtcgcgccatgggtaagaagaagctgtcc
gagctggaaaaggcctacgccggcttccggcagggcatgttggacaacaacttcagcgaa
gcggccatcaaggcgctgtgggacacggtccttcccttcgccggctacgcgttcaacaag
tcgcactccgccggctacggactcgtgtcgtactggactgcgtacctcaaggcgaactac
ccggccgagtacatggcaggtctgctcacatccgtcggtgacgacaaggacaagtccgcg
atctacctcgccgactgccgcaagttgggcatcaccgttctcccaccggacgtcaacgag
tcacgcgtcgacttcgcgaccgtcggcgacgacatccgtttcggtatggggtcggtgcgc
aacgtcggcgccaacgtcgttgcctcgatcatcaaggcgcgcacggagaaatcgaagttc
accgatttctccgactatctcggcaagatcgacgcgatggcttgcaacaagaaggtcacc
gaatctctcatcaaggccggtgctttcgactcgttgggtcacccgcgcaaaggcctgatg
ttggtccatgccgacgccatcgattccgtgatgagcaccaagaaggcagaggcgatcgga
cagttcgacctcttcggcggtgccgaggcggacgagtcgatcacctcggtgttcgacgtc
aagattcccgaggaggagtgggactccaaacatcgcctggcactcgaacgagagatgctg
gggctgtatgtttccggtcacccgctcaacggcgtcgagcacattcttcgccagcagtcc
gacacgtccatcgccgcgatactcgaaggcggcgttcaggacggtgcccaggtaactctc
ggcggcatcatcgcctcggtggaccgccgggtcaacaagaacggtctgacctggtgcatc
gtgcagctcgaagacctcgtgggtggaatcgaggtgctgttcttcccgcaggcctacgcc
gtgtacgggatggacatcgccgaggatgccatcgtgttggtcaaggctcgcgtttcgatc
cgagacgatcggatgtcgctgatcggcaacgaccttgcggtgcctgatatttcggcgatc
ggggtcgcgcgccccctgtcggtctcgctgccgcttcggcaatgcaccaaggacaagctc
agtgctctcaagcaggtgctgacgaggcaccccggaacatccgacgttcacgttcggctg
atcggtggaaccgagatcagcttgtggaaggtcgacgacgtccttcgggtcgaaccatcc
tcggctttgatgggcgacctgaaggcattactcgggccgagctgtctgacggtctga
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