Rhodococcus erythropolis BG43: XU06_16680
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Entry
XU06_16680 CDS
T03842
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
reb
Rhodococcus erythropolis BG43
Pathway
reb03030
DNA replication
reb03430
Mismatch repair
reb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XU06_16680
03430 Mismatch repair
XU06_16680
03440 Homologous recombination
XU06_16680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
reb03032
]
XU06_16680
03400 DNA repair and recombination proteins [BR:
reb03400
]
XU06_16680
Enzymes [BR:
reb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XU06_16680
DNA replication proteins [BR:
reb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XU06_16680
DNA repair and recombination proteins [BR:
reb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XU06_16680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AKE00754
LinkDB
All DBs
Position
3667072..3668754
Genome browser
AA seq
560 aa
AA seq
DB search
MSFDELDTPLSETTFVVVDLETTGGSADQDSITEIGAVKIRGGEVLGEMATLVDPGRSIP
PYIVELTGITTAMLIGAPPIERVLPAFLEFAEGAVLVAHNAPFDIGFLKAAASRSARPWP
AFRVLCTVKLARRVLTRDEAPSVKLSALAHLFQVTTQPTHRALDDARATVDVLHGLIDRV
GNQGVHSYSELVDYLPNISSHQRAKRSFAANLPRSPGVYLFRGPSDEALYIGTATDVRRR
VRNYFTGSETRGRMKEMVALATRVDHVECAHALEAGVRELRLLSAHAPPYNRRSKFPKRG
WWITLTDEAFPRLSVVRTPTADSIGPFTSRGDAVEVADTVAEFSRLRTCTKRLGRGAVHG
PDCPARELGACPASWAPELTAEDYAAAPETVRGFFRGTNDAPLQQMQARIDELSAHALFE
NAARLRDRTVAVSTAVRRTQRLAAVAAIEQLILARPTGDGGWELSVIRSGRLASAGLARR
GTHPMPVVDAITAAAETVLPDDAPFRGASPEELGLIARWLASDGVRIVSATSGYVEPAGG
AGKWEAWCRLARAGTESEHR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
ctgagcttcgacgagctggacacaccgctgagcgaaacgacgtttgtcgtcgtcgacctc
gagaccacaggtggaagcgccgaccaggactccatcaccgagatcggcgccgtcaagatc
cgcggtggcgaagtgctcggtgaaatggcaacactcgtcgatcccggccgatcgattccg
ccgtacatcgtcgaactgaccggaatcaccaccgccatgctgatcggcgcacctcccatc
gaacgtgtcctacccgcttttctcgaattcgccgagggcgcggtgctggtggcacacaac
gcgcccttcgacatcggtttcctcaaagcagcggcgtcacgcagcgcacgcccgtggccg
gcgttccgtgtgctgtgcactgtgaagctcgccaggcgcgtgctcacccgcgacgaggcg
ccttcggtcaaactctccgcactcgcccatctcttccaggtgaccacccaaccgacgcac
cgcgcgctcgacgacgcgcgtgcgaccgtcgacgtcctacacgggttgatcgacagagtc
gggaaccaaggcgtccacagttacagcgaactcgtcgactacctgcccaacatttcctca
catcagcgggccaaacggtccttcgccgcaaacctgccgcgaagcccgggtgtctacctt
ttccggggcccctcggacgaagccctctatataggaactgctaccgacgttcgacgccgc
gtccgcaactacttcaccggttcggagacccgcggccggatgaaggaaatggtcgcgctc
gccacccgtgtggaccacgtcgagtgcgcccatgcgctcgaggcaggggtgcgtgaacta
cgactactgagcgcgcatgcacccccgtacaaccgtcgctccaaattccccaaaagagga
tggtggatcactctcaccgacgaggcgtttcccagactgtccgtggttcgcacgcctacg
gccgattcgatcggcccgttcacctctcgcggcgacgcagtagaagtcgccgacaccgtc
gcagagttcagccgcctacgcacgtgcaccaaacgtctcgggcgcggcgccgttcacggc
cctgactgccccgctcgcgaactgggggcgtgtcccgcctcctgggcaccggaactcact
gcggaggactacgcggccgcccctgagactgtgcgtggattcttccggggaaccaacgac
gctcccctccaacaaatgcaggcgcgaatagacgagctgtccgcacacgcgttgttcgag
aatgctgctcgtctgcgtgaccgaacggtcgcagtctctaccgcagtgcggcgcactcag
cgactcgcagcagtcgcggcgatcgaacaactgattctcgcccgtcccaccggggacggc
ggctgggagctgtcggtgatccgttccggacgtctcgcgtccgccgggctcgccagacgt
ggaactcacccgatgcccgtcgtcgacgccatcaccgcggccgccgaaaccgtcctaccg
gacgacgcaccgttccgcggcgcgtcacccgaagaactgggcctgatcgcacggtggctc
gcatcggacggtgtccgaatcgtgtcggcgacatccggctacgtcgaacctgcgggcggc
gccggcaagtgggaagcctggtgccgactcgcgcgggccggtaccgaatccgaacatcga
tga
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