Rhodococcus erythropolis BG43: XU06_18975
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Entry
XU06_18975 CDS
T03842
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
reb
Rhodococcus erythropolis BG43
Pathway
reb03030
DNA replication
reb03430
Mismatch repair
reb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XU06_18975
03430 Mismatch repair
XU06_18975
03440 Homologous recombination
XU06_18975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
reb03032
]
XU06_18975
03400 DNA repair and recombination proteins [BR:
reb03400
]
XU06_18975
Enzymes [BR:
reb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XU06_18975
DNA replication proteins [BR:
reb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XU06_18975
DNA repair and recombination proteins [BR:
reb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XU06_18975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
PTCB-BRCT
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AKD98551
LinkDB
All DBs
Position
complement(4172025..4173941)
Genome browser
AA seq
638 aa
AA seq
DB search
MTSALSHAETLRLPADHRWVVLDIETSGMRSASHRVLSIAALVLREDGSVERQFSTLLNP
GCDPGPVHVHNLTPDRLAGAPRFEDIAEEFADLLSSRTMVAHNASFDYGFLDAEFQRAGF
GTPIEKRLCTLALSRRLELDVPNHRLATLAEYWKIEQVNAHDAYDDARVLVEVFGRSASL
AETLQLPLPVVGCKDRRATVHSREIKRVPSSFTNPGRLDLTHGLVQGMKIAISGPTSAPR
ATLAARLTDAGFEFTNTVSRQTSVLVCDNTASQSSKVRKAESDGIPVISEQQLEHLLERA
VPGEIKIEGASVGVSTVEPVPDTMTAPEVEVQREVVLVPEMIVSAQPRPDESTSGVRPSS
IATASPLANRKAKAWQGRRVLILGGTHLDGVIMRSRILQLGARPSLNFTTAVTEVLVLEG
GESDKRMARVTDRGLPKITESDVNEALVSGVVPAHMRLESRLSAPILMRGEVVDLPAAQS
SWSINVAWRAENVGDEFDVDVVAFLLDGTNKVDSDQDFVFYNNTVDEDGAVELSVDGDSE
QSVRADLDSLPAECQRVVIAAAVDGDKTFGDLGAVSVSIDGSDGTFATFVLDLGTVERTM
VLAEIYRRGNVWRLRAVGQGHNHGLGAMAVGYGVEVDD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgactagtgcgttgagccacgccgagacgcttcgtctgcctgcggaccaccggtgggtt
gttctcgacatcgagacgtccgggatgcggtcggcatcgcatcgtgtgctcagtatcgcc
gcattagtactgcgtgaggatggttccgtagagcgtcagttctcgactctgctcaatcca
ggatgcgatccggggcccgtccacgttcacaacctcactcccgaccgcttggctggtgcg
ccgcgtttcgaagacattgctgaggaattcgccgacttgctctcaagccggaccatggtg
gcacacaacgcgtcgttcgactacggcttcctcgacgcagagtttcaacgcgcaggtttt
ggcaccccgatcgagaagcggctgtgtactttggcgctctcgcgacgcctggagctcgac
gtacccaatcacaggctcgcaacactggccgagtattggaagatagaacaggtcaatgcg
cacgacgcctacgacgatgcgcgggtactcgtcgaggtcttcggcaggagcgcatctctc
gcggaaacgctgcaacttccgcttccagtggtggggtgtaaggaccgccgggccacggtc
cactctcgcgagatcaagcgagtgccgtcgtcattcaccaaccccggacgcctcgatctg
actcacggcttggtccaaggaatgaagatagcgatcagtggtccgacatccgcaccccgg
gctacgctggctgcccgcctcacggacgcgggattcgagttcacaaataccgtgagccga
cagacgagtgttctggtgtgtgacaacactgcatctcaaagctcgaaagtacgtaaggcc
gagtcggatggaattcccgtgatctcggagcagcagttggagcacttgttagaacgtgca
gtgccgggtgagatcaagattgagggcgcttccgtgggagtgagcactgttgaacccgtg
cctgacacgatgacagcgccggaagtcgaggtccagcgcgaggtggttctggtgccggag
atgatcgtatctgcgcaacctcgtcccgacgaatcgacctccggggtacggccatcatcg
atcgcgactgcatccccgctcgcgaatcgcaaggcgaaggcgtggcaggggcgtcgcgtt
ctgattctcggcggtacccatctcgacggcgtgatcatgcggtcgcgcatcctgcagctc
ggtgctcgtccgtctctcaacttcacaaccgcggtcaccgaggttttggtgttggaaggc
ggtgaatccgacaagcggatggcgagggtcacggatcgagggcttcctaagatcacggaa
tccgacgtcaacgaggcgttggtctcgggtgtagttcccgcccacatgaggctcgaatca
cgcttgtctgcaccgattttgatgcgtggcgaggtcgtcgatcttcctgccgctcagtcg
tcgtggtcgatcaatgttgcctggcgggcagaaaacgttggagacgaattcgacgtcgat
gtggttgcctttctccttgacggaaccaacaaggtcgattcggatcaagatttcgtcttc
tacaacaacaccgtggatgaggacggcgcagtcgagctctccgtcgacggtgacagtgag
cagagtgtccgtgcagatctcgactctttgcctgcggaatgtcaacgtgttgtcatcgca
gcagcagtcgacggtgacaagacgttcggcgacttaggagcagtctcggtcagcattgat
ggttccgacggaacatttgccacatttgtactcgatctcggaacggtcgagcggaccatg
gttctcgccgaaatctaccgccgcggaaatgtttggcggcttcgggcagtaggtcagggg
cataaccacggactcggtgctatggctgtcggctacggcgtcgaagtggatgattga
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