Rhodococcus erythropolis BG43: XU06_20980
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Entry
XU06_20980 CDS
T03842
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
reb
Rhodococcus erythropolis BG43
Pathway
reb03420
Nucleotide excision repair
reb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XU06_20980
03430 Mismatch repair
XU06_20980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
reb03400
]
XU06_20980
Enzymes [BR:
reb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XU06_20980
DNA repair and recombination proteins [BR:
reb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XU06_20980
MMR (mismatch excision repair)
Other MMR factors
XU06_20980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
AKD98885
LinkDB
All DBs
Position
complement(4617355..4619847)
Genome browser
AA seq
830 aa
AA seq
DB search
MNTYPALGEHDGHSQHDGGGARGHGAGSDALLEGLNPQQREAVVHAGSPLLIVAGAGSGK
TAVLTRRIAYLLAERGVTPGQILAITFTNKAAAEMRERVAALVGPRANAMWVSTFHSSCV
RILRAQAALLPGLNSNFSIYDSDDSRRLLTMISKDLELDTKRFSARLLATHISNLKNELV
GPEEAVVAADQDPAELPRLIAKVYGHYQQRLRAANALDFDDLIGETVALLQAFPQIAEYY
RRRFRHVLVDEYQDTNHAQYMLVRELVGGAGESDHAVAPAELCVVGDADQSIYAFRGATI
RNIEEFERDYPDARTILLEQNYRSTQNILSAANSVISKNTGRREKRLWTDSGEGELIVGY
VADNEHDEASFVASEIDRLVDQGETKFADIAVFYRTNNSSRALEEIFIRLGVPYKVVGGV
RFYERKEVRDIVAYLRVLANEDDTVSLRRILNTPRRGIGDRAEACVAVHSEHRNISFAAA
LRDGAEGKVALLNTRSQKAIASFLEMMDGLRALLPTPAADEDEPFELGDIGEVAEAVLER
TGYRAELAASSDPQDGARLDNLNELVSVAREFSSDARNAAGLIDPDDEETAAMREGEPDP
GSLAAFLERVSLVADADQLPDSDDGVVTMMTLHTAKGLEFPVVFVTGWEDGQFPHMRALG
DPAELSEERRLAYVGITRARQRLYLTRAIMRSAWGQPIQNPASRFIQEIPEDLINWRRED
PGTGGGFGSGRPGYGSGSRYGSQGGQGYGGGQNYGGGSGKAASSPSFGAARGRNNVLVLA
TGDRVSHDKYGLGTVLETKGTGPTATVTIDFGSAGKVRLMLIGGVPMVKL
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgtacccagcactcggtgagcacgacggacattcccagcacgacgggggcggc
gcgcggggacatggcgcgggttcggacgccctcctcgagggtctcaacccgcaacagcgc
gaggccgtggtccatgccggttcgccgttgctgatcgtcgcgggcgccggctcgggcaag
acggcagtactgacgcgtcgcatcgcctatctgctggccgaacggggtgtcacccccggt
cagatcctggccatcacgttcaccaacaaggctgcggccgagatgcgcgagcgtgtggcc
gctcttgtcggaccgcgtgccaacgccatgtgggtatcgacgttccactccagttgcgtg
cgcatcctgcgagcacaggcggcgctcctgcccggtttgaactcgaatttctcgatctac
gattccgacgattcgcgtcgactgctgacgatgatctcgaaggacctcgagctcgacacc
aaacgattctccgcgcggcttctcgccactcacatctccaacctgaagaacgaactcgtc
ggaccggaagaggcggttgtcgcagccgatcaggatccggccgaactgccgcgactgatc
gccaaggtctacggccattaccaacagcggttgcgtgcggcgaacgcactcgacttcgac
gatctcatcggtgagaccgttgcgcttctccaggcgtttccccagatcgccgagtactac
cgccgccgcttccgtcacgtgctcgtcgacgagtaccaggacaccaaccacgcgcagtac
atgctggtgcgtgaactggtcggcggtgccggagagtccgaccatgccgttgccccggcc
gaattgtgcgtcgtcggtgacgccgatcagtcgatctacgcattccgcggagccactatc
cgcaacatcgaagagttcgaacgcgactacccggacgctcggaccatccttctcgaacag
aactaccgttcgacgcagaacattctgtctgcggccaactccgtgatctccaagaacacc
ggccgacgtgaaaagcgtctgtggaccgattcgggtgaaggtgaactgatcgtcggctac
gttgcagacaacgagcacgacgaagcatcttttgtcgcctcggagatcgatcggctggtg
gaccagggcgagaccaaattcgccgacatcgcggtgttctaccggaccaacaactcctca
cgcgcgctcgaggagatcttcattcgactcggagtgccgtacaaggtggtcggcggcgtt
cgcttctacgagcgcaaggaagttcgggacatcgtcgcgtatctgcgcgtcctcgccaac
gaagacgacaccgtgagcctgcgacgcattctcaacacgccacgacgcggtatcggtgat
cgagccgaagcctgcgtcgctgtgcactccgagcatcgcaacatcagcttcgccgccgca
ctgcgcgacggcgcggaaggcaaagtggcgctgctcaatacgcggtcacagaaggccatc
gcgtcgttcctcgagatgatggacgggctgcgggccctgctgccgacaccggccgccgac
gaggacgaacccttcgaactcggtgacatcggtgaggtcgccgaggcggtgctcgagcga
accggctaccgcgccgagcttgcggccagcagcgatccacaggacggcgcgcggctcgac
aacttgaatgaacttgtcagcgtggcaagagaattcagctccgacgcacgaaacgcggcc
ggactgatcgatccggacgacgaggaaaccgcggcaatgcgtgaaggcgaacccgatccg
ggttcactcgccgccttcctcgaacgggtatcacttgtcgccgacgccgatcaactgccg
gactccgacgacggcgtcgtgacgatgatgacgcttcacaccgccaagggcctcgagttc
ccggtcgtcttcgtcaccggttgggaggacgggcagttcccgcacatgcgcgccctcggt
gatccggcagagctgtccgaagagcgtcgactcgcttacgtcggcatcacccgtgccagg
cagcgcctgtacctgacgcgcgcgatcatgcgttcggcttggggacaaccgatccagaac
ccggcgtcgcggttcatccaggagatcccggaggacctgatcaattggcgccgtgaggat
ccgggcaccggtggtggattcggaagcggcaggccgggttacggcagcggaagccgatac
ggcagccagggcggccagggatacggtggcgggcagaactacgggggagggtccggcaag
gctgcgtcgagtcccagtttcggtgccgcgcgtggccgcaacaacgttctggtccttgcc
acgggtgaccgcgtcagtcacgacaagtacggtctcggcaccgtgttggaaaccaagggc
accggacccaccgcgacggtcaccatcgacttcggtagcgcgggcaaggtgcggttgatg
ctcatcggcggtgtgccgatggtcaagctgtag
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