Rhodococcus erythropolis BG43: XU06_21710
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Entry
XU06_21710 CDS
T03842
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
reb
Rhodococcus erythropolis BG43
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
reb03400
]
XU06_21710
Enzymes [BR:
reb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
XU06_21710
DNA repair and recombination proteins [BR:
reb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
XU06_21710
Prokaryotic type
XU06_21710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AKE00887
LinkDB
All DBs
Position
complement(4770541..4771887)
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AA seq
448 aa
AA seq
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MSNSVVWFRRDLRVGDLPTLSAASDAGGRTLGLFVLDENLLGPAGSPRQDQLFANLTALD
HQLDGKLMVVRGDPADVVPRVAESVGAEEVHISADYGPYGRRRDAAVAEQVELIATGSPY
AVAPGRVTKADGDPYKVFTPYFRQWMEHGWRGPASTDAQTVRWFDPSDKEGGPRRVSIPA
PSAAVSDFVGEVGAFEQWKEYCENDLDRYDDERNRPDLDTTSRMSIPLKYGTIHPRTMLA
DLSKRLGDGAQAYRRQLAWRDFYADILFQRPDSARKNYDDKFDRLRHDGGVDADAAFTAW
CEGKTGFPIVDAGMRQLAAENWMHNRVRMIVASFLVKDLHIPWWRGARFFMSHLVDGDLA
SNQHGWQWTAGSGTDASPFFRVFNPITQGEKFDPDGTYVRRWVPELRDVPGKAVHSLKAM
RPVDYPDPIVDHAHEREEALRRYGEIKG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaactctgtggtctggtttcgacgtgatctgagggtaggtgaccttcccaccctg
agtgcagcgtcggatgccggcgggcggacgttgggattgttcgttctcgacgagaacctg
ctcggaccggcaggctcaccccgtcaggatcaactgttcgccaacttgacggcgctcgat
catcaactcgacggaaaactgatggttgttcgaggtgatccggcggacgtggtgccccgt
gtagcggaatccgttggcgccgaagaagttcacatcagtgccgactacggaccctacggc
cgacggcgcgacgcggccgtggcggagcaggtggagttgatcgccaccggatctccgtat
gccgtggcgcccggacgcgtcaccaaggcggacggtgatccgtacaaggtgttcacgccg
tacttccgtcagtggatggaacacggttggcggggccccgcgtcgaccgatgcgcagacg
gtccgttggttcgatccgagcgacaaggagggtggcccgcgccgggtgagtatccccgcg
ccatccgccgccgtcagcgatttcgtcggtgaggtcggcgccttcgaacagtggaaagaa
tactgtgagaacgatcttgaccggtacgacgacgaacgaaatcggcctgacctcgacacc
acgagccggatgtcgattccgctcaagtacggcacgatccatccgcgaacgatgttggca
gatctctccaagcgactgggcgacggcgctcaggcttaccgtcgccagttggcgtggcga
gacttctacgcagacatcctgtttcaacgccccgacagcgcgcggaaaaactacgacgac
aagttcgaccgtttacgtcacgacggtggagtggacgcagacgccgccttcacggcctgg
tgtgagggcaagaccggtttcccgatcgtggatgccggcatgcggcaactcgcggccgag
aactggatgcataatcgggtgcgaatgatcgtcgcgtcttttctggtgaaggacctacac
attccgtggtggcgtggcgcacggttcttcatgtcgcatctggtggacggtgacttggcc
tccaatcagcacgggtggcagtggactgcagggtcgggcacagatgcttcgcccttcttc
cgcgtcttcaaccccatcacgcagggagagaagttcgatcccgacggcacatacgtccgt
cggtgggttccagaactccgcgatgttcccgggaaggccgtccactcgttgaaggcgatg
cgcccggtcgactacccggacccgatcgtcgatcacgcgcatgagcgtgaggaagccttg
cgccggtacggcgagatcaagggctga
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