Rhodococcus erythropolis BG43: XU06_25190
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Entry
XU06_25190 CDS
T03842
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
reb
Rhodococcus erythropolis BG43
Pathway
reb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XU06_25190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
reb03000
]
XU06_25190
03400 DNA repair and recombination proteins [BR:
reb03400
]
XU06_25190
Enzymes [BR:
reb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
XU06_25190
Transcription factors [BR:
reb03000
]
Prokaryotic type
Helix-turn-helix
AraC family
XU06_25190
DNA repair and recombination proteins [BR:
reb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XU06_25190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
AKD99600
LinkDB
All DBs
Position
complement(5480309..5481154)
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AA seq
281 aa
AA seq
DB search
MSAVTLRFQAPYAVEPLTGALRAHCVAGLERHDDGVHTRVIPLPSGPAVMSVSWTDGGVV
VDSDVPAGDSAVLEVIVRRWLDLDADHTAVEAAFGSDELLAPLVAARPGLRVLGSVDGFE
TAVLTVLGQQVSLGAARTFGGRFVSAFGAPVEGEFLAFPDPDAVAAQSPEDIQKAVGLTT
VRARTVHTLATAAANGLDLSWDAEPVQFRQELLALPGIGPWTADYLTVRILGDRDAFVPD
DLVLKRALGVSSGKEAAALSERWRPWRAYALFHLWTKEAFL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcagtgacgctgcgctttcaggcgccctatgcagtcgaaccgctcaccggtgcc
ttgcgggctcactgcgtcgcaggcctcgagcgtcacgacgacggtgttcacaccagagtc
ataccgttgccttccggcccggcagttatgtcggtgtcgtggacagacggcggcgtcgtc
gtggattccgatgtgccagcgggggattccgcagtgctggaggtgatcgtgcgtcgttgg
ctcgacctcgacgccgatcacactgctgtcgaagcagcgttcggtagcgacgagttgttg
gccccactcgttgccgcccgtccgggattgcgggtgctcggctcggtggacgggttcgag
accgcagtgctcaccgttctgggacaacaggtttcgctcggcgcggcgaggacgttcggt
ggtcgttttgtcagcgcattcggagcgccggtggaaggggagtttcttgccttccctgat
ccggacgcggttgcagcgcaatcgccggaggacatacagaaagccgtcggattgaccaca
gtgcgcgcaagaacagtgcacacgttggcaactgcggcagcgaacggtctcgatctctcc
tgggatgcggagcctgtccaatttcgacaagagttgttggcgctaccgggaatcggaccg
tggaccgctgactatctcactgttcgaattctcggtgatcgcgacgccttcgtacccgac
gatctggtgttgaagcgagcgttgggggtctcgtcgggcaaagaagccgcagcgttgtcc
gagcgctggcgaccctggcgagcgtacgcactctttcatctgtggaccaaggaagcgttt
ctgtag
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