Rhodococcus erythropolis BG43: XU06_26455
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Entry
XU06_26455 CDS
T03842
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
reb
Rhodococcus erythropolis BG43
Pathway
reb00061
Fatty acid biosynthesis
reb00071
Fatty acid degradation
reb01100
Metabolic pathways
reb01212
Fatty acid metabolism
reb02024
Quorum sensing
reb04146
Peroxisome
Module
reb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
XU06_26455
00071 Fatty acid degradation
XU06_26455
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
XU06_26455
09145 Cellular community - prokaryotes
02024 Quorum sensing
XU06_26455
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
reb01004
]
XU06_26455
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
reb04147
]
XU06_26455
Enzymes [BR:
reb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
XU06_26455
Lipid biosynthesis proteins [BR:
reb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
XU06_26455
Exosome [BR:
reb04147
]
Exosomal proteins
Exosomal proteins of breast milk
XU06_26455
Exosomal proteins of breast cancer cells
XU06_26455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Big_6
Motif
Other DBs
NCBI-ProteinID:
AKD99825
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All DBs
Position
5716800..5718320
Genome browser
AA seq
506 aa
AA seq
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MVSVLDPVTRHAEVTPDNIAIRNSTAIRGTDEHWTYRQLHDASLAFAGRIRDAGLSVGDR
VLLAAPSVAEFVVAYMGIQAAGCVVVPINTMSAQPEVEYVLDDAEISLAIAWHQLGPAVQ
DAGSARGVPVWTLTEESAQADHAPATVVDRDAADTTAILYTSGTTGRPKGAQLTVGNLLS
AGEIGAESSRGNPSDRTGTGLPLFHIFGQGSVMMATFTGGGSLSLLARFDPAAMLDLVRR
DKLTIMAGVPTMWNAMLHAAADVDSSDFEQLRIAISGGASLPGEVARAFEARFNCTILEG
YGLTETSAFGTFNSIDRVAKIGYTGRAVPRTEVEVRDHDGNVCEAGTVGEVFIKGPTVMK
GYWKRPEDTAAVLSDDGWFRTGDLGETDPDGDLRIVDRVKDLIIRGGYNVYPGEVEEVLY
QHPDIIEAAVIGIPDDYYGEEVAAVVAVRPGSDLEADAVTSWARERLSAYKIPRVVQFID
ALPKGSTGKILKRSIDRTELLAQKQS
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggttagcgttctcgacccggtgacccgtcacgcggaagtcactccggacaacatcgca
attcgaaacagcactgcgatccgcggcacggatgaacactggacttaccggcagctccac
gacgcgtccctggcgttcgccggccgcattcgcgatgccgggttgagcgtaggcgatcgg
gttctcctagcggcaccgtcggtagcggaattcgtcgtggcgtacatgggaattcaggcc
gcaggttgtgtcgtggtgccgatcaacacgatgtcggcgcaacccgaagtcgagtacgtt
ctggacgacgcggagatttccctggccatcgcgtggcatcagctcggtcccgcagtccag
gatgcagggagtgcgcgcggtgtcccggtgtggacactcaccgaagaatcggcgcaggcc
gatcatgcacccgcaactgtggtcgaccgtgacgcagcagacacaacggcgattctctac
acctccggcaccaccggacgcccgaagggcgctcagctgaccgtcgggaatttgttgtcc
gccggtgagatcggcgccgagagcagccgcggaaacccttcggaccgcaccggaaccgga
ctgccgctcttccatatcttcggccagggttcggtcatgatggcaaccttcaccggcggc
ggatcactgtccctgctcgcccggttcgaccccgctgccatgctcgacctggtccgccgg
gacaagctcaccatcatggccggtgtccccaccatgtggaatgccatgctgcacgccgcc
gccgatgtggacagctccgacttcgaacaactcaggatcgcaatctccggtggcgcatca
cttcccggtgaagtcgctcgcgccttcgaagcacggttcaactgcacgatcctcgagggc
tacggcctcaccgagacgagcgcgttcgggactttcaacagcatcgaccgcgtcgcaaag
atcggatacaccggccgcgccgtaccgcgcaccgaggtcgaggtgcgtgatcacgacgga
aatgtctgcgaggcaggcacagtgggcgaggtgttcatcaaaggaccgacggtcatgaag
ggttactggaagcgccctgaagacaccgccgccgttctttccgacgacggatggttccgc
accggagacctcggtgagaccgatcccgacggggaccttcgcatcgtcgaccgagtgaag
gacctcatcatccgtggtggatacaacgtctatccgggcgaggtcgaagaggtgctctac
cagcaccccgacatcatcgaagccgcagtgatcggcatacccgacgactactacggggag
gaagttgccgcagtggtggccgtgcgtccaggctccgacctcgaagcagacgccgtcact
tcgtgggctcgggaacgtctctccgcctacaagattccccgagtcgtccagttcatcgac
gcactcccgaagggttcgacgggaaagatcctcaagcgatcgatcgaccgaaccgaactc
ctcgcccagaagcagagctga
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