Rhodococcus erythropolis BG43: XU06_28415
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Entry
XU06_28415 CDS
T03842
Name
(GenBank) WD-40 repeat protein
Organism
reb
Rhodococcus erythropolis BG43
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
nSTAND1
WD40_Prp19
WD40
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
HTH_31
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_SCAP
NBCH_WD40
AAA_16
AAA_29
Beta-prop_VPS8
DUF815
Lactonase
LVIVD
MCD_N
AAA_21
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AKE00151
LinkDB
All DBs
Position
complement(6136018..6139860)
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AA seq
1280 aa
AA seq
DB search
MNSKAEAGRHNQVDPGQIESRGQFAEALTALRKAAGLTVREAVERSGGLHGTVSGWFAGQ
HLPTPASTPMFFALLKACGVDSEDERQRWISAVQRVRQLTARRRGDATVPYRGLESFRQE
DAEWFFGRDELTANLAERVASAIRGVGRSQFMVIGASGSGKSSLLRAGLAPKVAEGDSRF
DGWRVEILQPGTGGIPSSISDEPTVLILDQFEELWTQCDGDRREEILRTLAELGENTIAV
IGMRADFYGLAAEEPLLVPLLDDSPMVVGPLTDEQLREVIVEPAIKAGMTVQSELVQVLV
SELTPRGSRTASDPGALPLLSHALLGTWQRSTRKTLTVSDYYATDGIAGAVQQSAEEVYG
ELTERQQQLARRIFLRLVNVDEVTQTRRRAPRTELFLGDDVDDVNTVIDRFALRRLLTVD
EETVEVSHEVLLSAWSRLRDWIDSDRAGLAVHRRFTYAAQVWEDSGRDPGALLGPARLHL
TEEWLNSGELGLPLEPSRTRAADLNATEREYLAASIEHRDQQEFADRRRTRVLRRLVTAL
AAASVIALVLAVVATVAGIGANRQRVQADTARDEAMSRQVATESIRMRERDPSLASQLAL
AAFAVNETAEARSALLDASGVHSATRIIGPPGAMKARINPAGTVVAVGGSDGKVRLYPMV
DGVASAVPQAEFLGVSEGTALFAVAYSPDGRLLATGGAGGAALWDVSDPENPVRGTLPVD
GERVVQDMEFSPDGTKLVAGTSTPDVLRWNIDVSANAVALPALPHPADGIVTATFSPDGR
FLVVGGRQSTLRVWDVAKWGEESAPIFATEPNGTTVHYLGVAFSPDGRELAAGTTGREVV
RWDMSDPARPTPLPALTGFSSYVNELNYGKDGTRLAAGSSDNSVRVWDPRTGALIETLPD
SGAVTTVDYSDDGRNLVTGGLNGVTRVWALPGPVWSGPRDTIFTSPFAADGSRLVAGVGA
RGGAMLAWNTEDLDRPAVMPELKPQGDDSFSGASAVSADGNLAVSGTGGGGAYLWDLSDP
ASPRIYSEPAVYVKGIVAVVALNPAGDLLAVSSQDDNSIALVDVSDPSEPKLLSSTDVGS
YPQMMAFQPGADILAIANAKNEVDLWDVSNPASPRVAATVGGFESYALAVSFSADGTLLA
AGSADHRVAVWDVRTPSAPEELARLLGPEGAIYSISFNRAGDRLAAGVGDGTVWLWDIET
PSRSTRFATLSAYPGRVNDAQFAGESDMVAGSGSDKTVRLWGIDPDSVVDRLCRTAGSPI
TEAEWERYLPGVPYQDPCAG
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgaaggcggaagccggtaggcacaatcaggtcgatccgggccagatcgagtcg
cgtggacagtttgctgaggcgctcacggcgttgcggaaggcagccggactgacggttcgc
gaagcggtcgagcgttcgggtggtttgcacggaaccgtcagcggatggtttgccggccaa
cacctaccgacgccggcgagtaccccgatgtttttcgcgctcctcaaggcgtgcggcgtc
gattccgaggatgagcggcagcgctggatcagtgcggtgcaacgagtgaggcagttgacg
gccagacgacgcggcgacgccaccgttccgtaccgaggtctcgaatctttccgacaagag
gacgccgagtggttcttcggtcgagacgaactcactgccaacttggccgaacgggtggcg
tcggcgatacgaggtgtcggccgcagtcagttcatggtgatcggtgcttccggatcgggt
aagtcgtcgttgctgcgggccggactcgcccccaaggttgccgagggcgattcacggttc
gacggctggcgggtggaaatcctgcagccgggtacgggaggaattccgtcgtcgatttcc
gacgaaccaaccgtcttgatcctcgaccagttcgaggaactgtggacgcagtgcgacggt
gatcggcgcgaggaaatactgcggactctcgcggaactcggtgagaacaccatcgccgtc
atcggaatgcgcgccgacttctacgggctcgcggcggaggaaccgcttttggtgccgctg
ctcgacgattcgccgatggtggtcgggccactgaccgacgaacaattgcgcgaggtgatc
gtcgagccggcgatcaaggccgggatgaccgtgcagagcgaattggttcaggttctggtc
tccgagctgacaccacgcggctcgcgtacggcgagcgaccccggagctttgcccttgctg
tcacacgcactgttggggacctggcaacggtcgacgcgtaaaactctgaccgtctcggat
tactacgccaccgacgggatagccggagccgtccagcaaagcgcggaggaagtgtacggc
gagctcacagagcggcagcagcagttggcgcgcaggatcttcctgcgattggtcaacgtc
gacgaagtgacgcagacgcgtcggcgtgcaccgcgcaccgaactcttcctcggtgacgac
gtcgacgacgtgaacaccgtcatcgaccggttcgccttacggcgccttctcaccgtcgac
gaagagacggtcgaggtttcgcacgaggtcttactgtcagcgtggagtcggcttcgcgat
tggatcgactcggaccgcgccggcctggcggtgcatcgccggttcacgtacgcggcgcag
gtgtgggaagacagtggacgcgaccccggtgcgctgctcggacccgcacgtcttcacctg
acggaagaatggctgaactcgggtgaactcggtctcccactggaaccgagtcggacccgc
gccgccgacctcaacgccaccgagcgggagtacctcgctgcgagcatcgagcatcgtgat
cagcaggaatttgccgatcgccgacgtacacgcgttctgcgacggctcgtgactgcgttg
gcagccgcgtcggtgatcgctctggtgttggcggtggttgcgaccgtcgccggtatcgga
gcgaatcgtcaacgtgtccaagcagataccgcgcgagacgaggcgatgtcgcgtcaggtg
gccaccgagtcgatcaggatgcgcgagcgggatccgtcgctggcgtcgcagcttgctctg
gcggcatttgcggtcaacgaaacggccgaagcccgctcggcattgctggatgcgtcgggc
gttcattcggctactcgcatcatcggaccgcccggcgcgatgaaggcccggataaaccca
gccggaactgttgtggcggtaggtggttcggatgggaaggtcagactttatccgatggtg
gacggtgtggcctcagctgttccgcaggcggagttcctcggagtctcggagggcacggcg
ctctttgccgtcgcctacagcccggacggacggctgcttgcgaccggtggcgccggcggc
gctgcgctgtgggacgtgtcggatcccgagaatccggtccgtggaactcttcccgtcgac
ggtgaacgcgtagtgcaggacatggagttcagtccagacggaaccaagctggtcgccggt
acctcgacgcccgacgtcctgcgatggaacatcgacgtttccgcgaatgccgttgctttg
cctgctcttccgcacccagctgacggcatcgtcaccgcgacgttcagtcctgacggacgt
ttcctcgtggtaggcgggcgtcaatcgacacttcgtgtgtgggacgtcgcgaagtggggt
gaggaatcggcgccgatcttcgcgaccgagccgaacggcaccaccgtccactacctcggt
gtcgccttcagtccggacggacgcgagcttgcggcgggaaccactggcagggaggtggtt
cggtgggacatgagcgatccggcgcgccccactcccctgccggcactgacgggattttcc
agctacgtcaacgaactcaactacggcaaagacggaacacgtcttgccgcaggaagttcc
gacaactccgtgcgcgtgtgggacccccgaaccggggcgttgatcgaaacacttccggac
agtggggcggtgaccaccgtcgactacagcgacgacggccgcaacctggtcaccggagga
ctcaacggtgtgactcgcgtgtgggctctaccgggtccggtctggtcgggacctcgggac
acgattttcaccagtccctttgccgcggacggctcgcgtctggtggccggcgtcggggcc
aggggtggcgcgatgttggcgtggaacaccgaggatctcgatcgccccgcggtgatgccg
gagttgaaaccgcaaggggacgactctttcagcggtgcgtcggcggtgtcggcagacggg
aacctggctgtgagcggcaccggcggcggcggtgcctatctttgggacctgagtgatccg
gcgtcgccacggatctacagcgaacccgcggtgtacgtgaagggcatcgtggcggtcgtc
gcgttgaatcccgccggagatctgctggcggtgtcctcgcaggacgacaacagcattgcg
ttggtcgacgtttccgatccatcggaaccgaagctgctgtcgtcgaccgatgtcggctct
tacccgcagatgatggcatttcaaccgggcgccgacatactggcgatcgcgaacgccaag
aacgaagtggatctgtgggatgtgtcgaacccagcgtcgccccgtgtggcggcgacggtg
ggtggattcgaaagttacgcactagcagtgtctttcagcgccgacgggacgttgttggcc
gccggaagtgcggatcacagggtcgccgtgtgggacgtacgcacaccgtcggcacccgag
gagctcgctcgtcttctcggccccgagggcgcaatctattcgatctcgttcaaccgcgcc
ggtgatcggctcgctgccggtgtcggcgacggaaccgtctggctctgggatatcgagacc
ccctcgcggtcaacacgatttgcgacgctgtccgcctacccgggtcgagtcaacgacgct
cagttcgccggcgagagtgacatggtcgcgggcagcgggtcggacaagaccgttcgcttg
tggggaatcgaccccgacagcgtcgttgatcgattgtgccgcaccgcaggatctcccatc
acggaagccgaatgggagcgttacctgcccggtgttccctatcaggatccgtgtgccggc
tga
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