KEGG   Rhizobium etli CIAT 652: RHECIAT_CH0000006
Entry
RHECIAT_CH0000006 CDS       T00720                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon chain protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rec  Rhizobium etli CIAT 652
Pathway
rec03030  DNA replication
rec03430  Mismatch repair
rec03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RHECIAT_CH0000006 (dnaQ)
   03430 Mismatch repair
    RHECIAT_CH0000006 (dnaQ)
   03440 Homologous recombination
    RHECIAT_CH0000006 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rec03032]
    RHECIAT_CH0000006 (dnaQ)
   03400 DNA repair and recombination proteins [BR:rec03400]
    RHECIAT_CH0000006 (dnaQ)
Enzymes [BR:rec01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RHECIAT_CH0000006 (dnaQ)
DNA replication proteins [BR:rec03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RHECIAT_CH0000006 (dnaQ)
DNA repair and recombination proteins [BR:rec03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RHECIAT_CH0000006 (dnaQ)
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ACE89009
UniProt: B3PVT6
LinkDB
Position
3382..4107
AA seq 241 aa
MREIIFDTETTGLDNRMDRIIEIGGIELFNHFPTGNTLHIYINPGDQKVHPDALAVHGIT
DEFLKDKKAFAEVAEEILAFFGDAKWIAHNATFDMGFINAEFARIGLPPILPERVVDTLS
MARRKHPMGPNSLDALCRRYGVDNSHRAKHGALLDSELLAEVYIEMIGGRQAALGLGLSG
QSGQTARGEMAMEDDGVISAVLERPRPLAPRLSQAEAQAHAALVSKLGDKGIWSKFASPP
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcgtgagatcattttcgatacggaaaccaccggcctcgacaaccggatggaccgcatc
atcgaaatcggcggcatcgaactcttcaatcactttccgaccggcaacacgctacatatc
tacatcaatccgggagatcagaaggtccatccggatgcgctcgccgtgcatggcattacc
gacgaattcctgaaggacaagaaagccttcgccgaggtcgcagaagaaatccttgccttc
ttcggcgatgccaagtggatcgcccacaacgccaccttcgacatgggattcatcaacgcc
gaattcgcgcggatcggtttgccgccgatcctgccggagcgggtggtcgatacgctgtct
atggcgcggcgcaaacatccgatgggaccgaattcgctcgacgcactttgccggcgttac
ggcgtcgacaattcgcaccgcgccaaacacggcgcgcttctcgactccgaactgctggcc
gaagtctacatcgaaatgatcggcggcaggcaggcggccctgggcctcggcctatcgggc
caatccggccagacggcgcgcggcgaaatggcgatggaagatgatggggtgatatcagcg
gtgctcgagcggccccgtccgcttgcgccccgcctcagccaggccgaagcgcaggcgcat
gcggcgctggtttccaagctcggcgataagggcatctggtcgaaattcgccagcccgccg
gcgtga

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