Rhizobium etli CIAT 652: RHECIAT_CH0000027
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Entry
RHECIAT_CH0000027 CDS
T00720
Name
(GenBank) probable ATP-dependent exonuclease V protein, nuclease and helicase domains
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rec
Rhizobium etli CIAT 652
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rec03400
]
RHECIAT_CH0000027
Enzymes [BR:
rec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RHECIAT_CH0000027
DNA repair and recombination proteins [BR:
rec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RHECIAT_CH0000027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
DEAD
AAA_30
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ACE89030
UniProt:
B3PVV7
LinkDB
All DBs
Position
complement(22361..25912)
Genome browser
AA seq
1183 aa
AA seq
DB search
MSEVSDLPTDDDPGAWIGWTTIQQAIASDPLRSAWVSANAGSGKTHVLTQRVIRLLLAGA
RPSAILCLTYTKAAASEMSNRVFERLADWVVLDDDDLSRRIMQIEGTAPDRIKLAEARRL
FAKALETPGGLKIQTIHAFCEALLHQFPLEANVAGHFSVLDDRAAAALLSDARRALLTAT
APEEGSALAEAFAYVLNLGDESGLENLLGDIVANRNAIRRFAAAAEQQGGVDMVLRKRLG
LATDDTERGIAGEYWPLPELSGGTLELYLSMADQKGGAKAQEVAYGLRLAGRERDGARRA
AMLEKIFLTAKGEPKTDSQFLVKAMLAEAPQLTEAIAAARAHVAASRDRLKLMRMHGATQ
AALVLADRLNHDYEELKKQRSQLDFEDLITRTADLLTKSGVGPWIHYKLDRGIDHILVDE
AQDTSPIQWSVIQSLAEDFFSGESARPIVRTLFAVGDEKQSIYSFQGARPERFSEESDRT
RRRVSDSGQSFSSVRLPLSFRSTADVLEAVDEIFRTADNARGLSAVGEPVVHRSSRIGHP
GAVDLWDMVAPEAAVKEEDWTAPFDATPESAPAAILARRIAHSIGALVGRETIVDKGKER
LIEAGDILVLVRKRDAFVNALTRALKRRGDIPVAGADRLVLTSHIAVQDLLALGRFLLLP
EDDLSLAAVLKSPLFDLSEEDIFAIAALRGDNESAWSHLRKFAADGNERFRAAVEKLELF
LRQSKNLSVHDFYARLLGSHGGRRQFLARLGTEVSDILDEFLTFTLDHESSGLPGLQSFI
STLELEAPEVKREQDKGRNEVRIMTVHASKGLEAPIVFLVDGGSKAFTHTHLPKLRLIET
EPDEPPMPAWVPVADLANSLTQNDAARIQILAEEEYRRLLYVAMTRAADRLVVCGYRGVR
VNNDTWHMMISTALSEGHPHVEAASFSDPDGEWPGIKWRVPRVERSFERINRSEARDNEI
SLPEGLLRPLPPQAELPRPLSPSGAGTIIDEDEGGLVVVSPLFSEKQGSDRSLEKGRLLH
RMLQALPDIPPEERPGAAQRYAERAARFWSEAERRKLVDSVLKLLDEKDLQPVLGEQARP
EVSIMGTLTLDGRRYAVSGRIDRLAVLADRVVILDYKTNRVPPATEEAIPFAHRAQLAIY
REILAPLYPGKRIDCMLVYTENASLYTLSEKALGLALAGLKTK
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggtaagcgaccttccgaccgatgacgatcctggggcctggatcggctggacg
acgatccagcaggcgatcgcctccgatccgctgcgctcggcatgggtttcggccaatgcc
ggttccggcaagacgcatgtcctgacccagcgcgtcatccggcttctgctcgccggcgcc
cggccctccgccattctctgcctgacctacaccaaggccgcggcatcggaaatgtcgaac
cgcgtcttcgaacggctggccgactgggtggtgctggacgatgacgatctcagccggcgg
atcatgcagatcgaagggacggcacccgatcgcatcaaactggccgaggcccggcggctg
tttgccaaggcgctggagacgccgggcggcttgaagatccagacgatccacgccttttgc
gaggcgctgctgcaccagttccctctggaggccaatgtcgccgggcatttctcggttctc
gacgatcgcgccgccgcggcgctgctttccgatgcgcgccgggcgctgctgacggcgacc
gcgccggaagaaggcagcgccctggcagaggctttcgcctacgtgctcaatctcggcgac
gaatccggcctggaaaacctgctcggcgatatcgtcgccaaccgcaacgccatccgccgc
tttgccgcggccgccgaacagcagggcggcgtggacatggttctgcgcaaaaggctcggt
ctcgccaccgatgacacggagagaggcattgcgggagagtattggccgctgccggaactg
tcgggcggcacgctggaactttatctgtcgatggccgatcaaaaggggggcgccaaggcg
caggaggtggcctatggcctcaggctcgctggccgggagcgggatggcgcccgacgcgcc
gcgatgctcgagaaaattttcctgacggcgaagggcgagccgaaaacggactcgcagttc
ctggtcaaggccatgcttgccgaagcgccgcaattgaccgaggccatcgccgccgcccgc
gcgcatgtcgcggcaagccgcgaccggctgaaactgatgcggatgcacggcgccacgcag
gccgcgctcgtgctcgccgaccggctgaatcacgattacgaggaactgaagaaacagcgc
agccaactcgatttcgaggatctgatcacgcgcaccgccgacctgctgacgaagagcggc
gtcggtccctggatccattacaagctcgaccggggtatcgatcacatcctcgtcgacgag
gcccaggataccagtccgatccaatggagcgtcatccagtcgctcgccgaggatttcttt
tccggcgagagtgcccggccgatcgtgcgcacgctgtttgccgtcggcgacgagaaacag
tcgatctattcctttcagggggcgcggcccgagcgtttttccgaagagagcgaccggacg
cggcggcgcgtctccgacagcgggcagagcttctcctccgtgcggctgccgctctccttc
cgctcgaccgccgacgtgctcgaggccgtcgacgagatcttcagaacagctgacaatgcg
cgcggcctcagcgccgtcggcgagccggtcgtgcatcgttccagccgcatcggacatccg
ggcgccgtcgatctctgggacatggtcgcgccggaagcggcggtaaaggaagaggattgg
acggcccccttcgatgcgacgccggaaagcgcgcccgccgcaattctggcccggcggatc
gcccattcgatcggcgcgctggtcggccgtgagacgatcgtcgacaagggcaaggagcgg
ctgatcgaggccggcgatattctggtgctggtgcgcaagcgcgacgccttcgtcaatgcg
ctgacgcgcgccttgaagcgtcgcggcgacattcccgtcgccggcgccgacaggcttgtg
ctgaccagccacatcgcggtgcaggatctgctcgcactcggccgcttcctgcttctgccg
gaggatgacctgtcgctcgccgccgtgctgaagagcccgcttttcgatctctccgaagag
gacatctttgccatcgcggcactgcggggcgacaatgagagcgcctggagccatctgagg
aaattcgccgccgacggcaacgaacgtttccgcgcggcggtcgaaaagctggaactgttc
ctccgacaatcgaaaaacctatcggtgcatgatttctatgcgcgcctgctgggcagccac
ggcggacggcggcagtttcttgcccgccttggcaccgaagttagcgatatcctcgacgaa
ttcctgaccttcaccctcgaccatgagagctccggccttcccgggctgcaatccttcatc
tcgacgctcgagctcgaagcgcccgaggtgaaacgcgagcaggacaagggacgcaatgag
gtcaggatcatgaccgtgcatgcctcaaagggtcttgaagcaccaatcgttttcctggtc
gacggcggctcaaaagccttcacgcatacgcatctgccgaagcttcgcctgatcgaaacc
gagccggacgaaccgccgatgcctgcctgggttccggtcgccgacctcgccaactcgctg
acacagaacgatgctgcgcgcatccagatactggccgaagaggagtatcgccggctgctc
tatgtcgccatgacgcgggccgccgaccggctggtcgtctgcggctatcgcggcgtgcgc
gtcaacaacgacacctggcatatgatgatttccactgcgctcagcgagggccacccgcac
gtggaggcggccagcttctcggaccctgacggggaatggcccggcatcaaatggcgcgtg
ccgcgggtggagcggagcttcgagcgtatcaaccgcagcgaggcgcgcgacaacgaaatc
agcctgccggaaggcctgttgcggccgttgccgccacaggcggagctgccccggcccctc
agcccttccggcgccggcacgatcatcgacgaagacgaaggcggcctggttgtcgtttcg
ccgctcttttcggagaagcaaggcagcgatcgctcgctggagaagggcaggctgctgcat
cgcatgctgcaggcgcttcccgatattccgccggaggagcggcccggtgcggcacagcgt
tacgccgaacgggcggcccgtttctggtcggaggccgaacgtcgcaagctggtcgattcg
gttctgaaactattggacgagaaggacttgcagcccgtcctcggcgagcaggcccggcct
gaggtctcgatcatggggacattgaccctcgacggcagacgctatgccgtctccggccgc
atcgatcggctggcggtgcttgccgatcgcgtcgtcattctggattacaaaaccaatcgg
gtgccgccggcgaccgaagaggccatccccttcgcccaccgggcacagctggcgatctat
cgcgagatcttggcgccgctctatcccggcaagcgcatcgactgcatgcttgtctatacc
gagaatgcctcgctctacacgctgagcgaaaaggcgcttggtttggcgcttgcaggactg
aagacaaagtga
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