Rhizobium etli CIAT 652: RHECIAT_CH0000147
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Entry
RHECIAT_CH0000147 CDS
T00720
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RHECIAT_CH0000147 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rec03019
]
RHECIAT_CH0000147 (pnp)
03016 Transfer RNA biogenesis [BR:
rec03016
]
RHECIAT_CH0000147 (pnp)
Enzymes [BR:
rec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RHECIAT_CH0000147 (pnp)
Messenger RNA biogenesis [BR:
rec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RHECIAT_CH0000147 (pnp)
Transfer RNA biogenesis [BR:
rec03016
]
Prokaryotic type
tRNA degradation factors
RHECIAT_CH0000147 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
ACE89143
UniProt:
B3PXD7
LinkDB
All DBs
Position
complement(160741..162861)
Genome browser
AA seq
706 aa
AA seq
DB search
MEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKAPKPGQDFFPLTVNYQEK
TYAAGKIPGGYFKREGRPSENETLVSRLIDRPIRPLFPEGYKNDTQVVVTVIQHDLENNP
DILSMVATSAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESSLDLVVAGTYDAV
LMVESEAKELPEDVMLGAVMFGHKGFQPVLDAIIKLAEVAAKEPRDFQPEDYSALESEML
GLAEAELREAYKITQKADRYAAVDAVKAKVKAHFLPEEGEAKYTAEEVGAIFKHLQAKIV
RWNILDTKSRIDGRDLETVRPIVSEVGLLPRTHGSALFTRGETQAIVVATLGTGEDEQYV
DSLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPSAEQFPYTL
RVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGDRFAVLSDILGDE
DHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKVALSQAQGGRTHILGEMAKAITESR
GQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIASSSGKEI
EAARKWIHSIVAEPEIGQIYEGTVVKTADFGAFVNFFGARDGLVHISQLASERVAKTQDV
VKEGDKVWVKLLGFDERGKVRLSMKVVDQATGQEIANEKKKEEAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtggaaatcgagtgggccggccgcccgctgaagcttgaaaccggcaagatcgcccgtcag
gccgacggcgcggttctcgccacttacggcgaaaccgttgttctcgccaccgtcgtttcg
gccaaggcgccgaagcccggccaggacttctttccgctgaccgtcaactaccaggaaaag
acctacgcagccggcaagatccccggcggctatttcaagcgcgaaggacgcccgagcgaa
aacgaaaccctcgtttcccgcctgatcgaccgtccgatccgcccgctcttcccggaaggc
tacaagaacgacacgcaggtcgtcgttaccgtcatccagcacgaccttgaaaacaacccc
gacatcctgtcgatggtcgcgacctcggcagcgctgacgctctccggcgtccccttcatg
ggcccggtcggcggtgcgcgcgtcggctacatcaacggcgaatatgttctcaacccgcat
ctcgacgagatggacgagtcgagcctcgatctcgtcgttgccggcacctacgacgccgtg
ctgatggtcgaatccgaagccaaggaactgcccgaggacgtcatgctcggcgccgtcatg
ttcggccacaagggtttccaacccgttctcgacgcgatcatcaagctcgccgaagttgcc
gccaaggagccgcgtgacttccagccggaggactattccgcgctcgaaagcgaaatgctc
ggccttgccgaagccgaactgcgtgaagcctacaagatcacccagaaggccgaccgctac
gccgccgtcgacgccgtcaaggcgaaggtgaaggcgcatttcctccccgaggaaggcgaa
gccaagtacacggccgaagaagtcggcgcgatcttcaagcacctgcaggccaagatcgtc
cgctggaacattctcgacaccaagagccgtatcgacggccgcgacctcgaaaccgttcgt
ccgatcgtttcggaagtcgggcttctgccgcgcacccatggttcggcgctgttcacccgc
ggcgaaacccaggcgatcgtcgttgccacgctcggcaccggcgaagacgaacaatatgtc
gacagcctgacgggcatgtacaaggagcgcttcttgctccactacaacttcccgccctac
tccgtcggcgagaccggccgcatgggctccccgggccgccgcgaaatcggccacggcaag
ctcgcatggcgcgccatccgtccgatgctgccgtcggccgagcagttcccctacacgctg
cgcgtcgtctccgagatcaccgagtcgaacggctcgtcctcgatggcgaccgtctgcggc
acctcgctcgccctgatggacgccggcgttccgctggccaagccggttgccggtatcgcc
atgggtctgatcctggaaggcgatcgcttcgccgttctctccgacatcctcggtgacgaa
gaccacctcggcgacatggacttcaaggttgcaggtacggccgacggcatcacctcgctg
cagatggacatcaagatcgccggcatcaccgaagagatcatgaaggtcgcgctcagccag
gcccagggcggccgcacccacattctcggtgaaatggccaaggcgatcaccgaaagccgc
ggccagctcggcgaattcgctccgcgcatcgaagtcatgaacattccggtcgacaagatc
cgcgaagtcatcggctccggcggcaaggtcatccgcgaaatcgtcgaaaagaccggcgcg
aagatcaacatcgaggatgacggcaccgtcaagatcgcctcctcttccggcaaggaaatc
gaagcggcccgcaagtggatccactcgatcgttgccgagcctgaaatcggccagatctac
gaaggcacggttgtcaagaccgccgacttcggcgccttcgtcaacttcttcggcgcccgc
gacggcctcgtccatatctcgcagctcgcttccgagcgcgttgccaagacgcaggacgtc
gtcaaggaaggcgacaaggtctgggtcaagctgctcggcttcgacgaacgcggcaaggtt
cgcctgtcgatgaaggtcgtcgaccaggcgaccggccaggagatcgcgaacgagaagaag
aaggaagaagcggccgaataa
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integrated database retrieval system
