Rhizobium etli CIAT 652: RHECIAT_CH0000190
Help
Entry
RHECIAT_CH0000190 CDS
T00720
Symbol
polA
Name
(GenBank) DNA-directed DNA polymerase, DNA polymerase I protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec03030
DNA replication
rec03410
Base excision repair
rec03420
Nucleotide excision repair
rec03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RHECIAT_CH0000190 (polA)
03410 Base excision repair
RHECIAT_CH0000190 (polA)
03420 Nucleotide excision repair
RHECIAT_CH0000190 (polA)
03440 Homologous recombination
RHECIAT_CH0000190 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rec03032
]
RHECIAT_CH0000190 (polA)
03400 DNA repair and recombination proteins [BR:
rec03400
]
RHECIAT_CH0000190 (polA)
Enzymes [BR:
rec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RHECIAT_CH0000190 (polA)
DNA replication proteins [BR:
rec03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RHECIAT_CH0000190 (polA)
DNA repair and recombination proteins [BR:
rec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RHECIAT_CH0000190 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RHECIAT_CH0000190 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ACE89186
UniProt:
B3PXI0
LinkDB
All DBs
Position
205998..208991
Genome browser
AA seq
997 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHALPPLTRKTDGLPVGAVSGFCNMLWKLLRDARNTDVGVT
PTHLAVIFDYSAKTFRKDLYDAYKANRSAPPEELVPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEAVGADVTIVSSDKDLMQLVTPNVHMYDSMKDKQIGIPDVIEKWGVPPE
KMIDLQAMTGDSVDNVPGIPGIGPKTAAQLLEEYGDLDTLLERATEIKQVKRRETILANI
EMARISRELVRLRTDVPLDLDLDALVLEPQNGPKLIGFLKTMEFTTLTRRVAEVCDCDAS
AIEPAVVRIEWGDAAHGPDLDAAEPAPVAGGIPEVSGQSVPVPPRAKAGVEGAFSPADLA
KARAEAFAALPFDHSAYVTIRDLATLDRWIADARDTGLVAFDTETTSLDAMQAELVGFSM
AIADNVADPTGTKIRAAYLPLAHKNGVGDLLGGGLAENQVPMRDALPRLKALLEDESVLK
VAQNLKYDYLLLKRYGIETKSFDDTMLISYVLDAGTGAHGMDPLSEKFLGHTPIPYKDVA
GSGRANVTFDLVDIDRATHYAAEDADVTLRLWLVLKPRLVAAGLTSVYERLERPLLPVLA
RMEARGITVDRQILSRLSGELAQGAARLEDEIYTLAGERFNIGSPKQLGDILFGKMGLAG
GSKTKTGQWSTSASVLEDLAAAGFELPRKIVDWRQLTKLKSTYTDALPGYVHPETKRVHT
SYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLISADYSQIELRVLAHV
AEIPQLTKAFEDGVDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAFGLANQL
SIERSEAGDYIKKYFERFPGIRDYMESRKAMARDKGYVETIFGRRINYPEIRSSNPSVRA
FNERAAINAPIQGSAADVIRRAMIKIEPALAEAGLAERVRMLLQVHDELIFEVEDEDVDK
AMPIIVSVMENATMPALEMRVPLKVDARAATNWDEAH
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcacctcttcctagtcgacggttccggattcatctttcgggcgttt
catgcattgccgccgctgacgcgcaagacggacggtctgccggtcggcgccgtttccggt
ttctgcaacatgctgtggaagctcctgagggacgcgcgcaataccgatgtcggggtgacg
ccgacccatcttgccgtcatcttcgattattccgccaagacgttccgcaaggatctctac
gacgcttacaaggcgaaccgttcggccccgcccgaagagctcgtcccgcaattcgggctc
atccgcgaggcaacccgcgccttcaacctgccctgcatcgagaccgaaggcttcgaggct
gacgatatcattgccacctatgcccgccaggccgaagccgtgggtgccgatgtcaccatc
gtctcctccgacaaggatctgatgcagctcgtcactccgaacgtccacatgtatgacagc
atgaaggacaagcagatcggcattcccgacgtgatcgagaaatggggcgtgccgccggaa
aagatgattgacctgcaggcgatgaccggcgactccgtcgacaacgtgccaggcattccc
ggtattggtccgaaaaccgctgcccagctccttgaggaatacggcgatctcgacacgctg
ctcgaacgcgctaccgagatcaagcaggtcaagcggcgcgagacgatccttgccaacatc
gagatggcgaggatttcccgcgaactcgtgcggttgcgcaccgacgtgccgctcgatctc
gatctcgacgcgctggtgctggagccgcagaacggtccgaagctgatcggctttctcaag
acgatggaattcacgacgctgacgcgccgcgtcgcggaagtctgcgattgcgatgcgagc
gccatcgaaccggcggtcgtccgcatcgaatggggtgacgccgcccatggtcccgatctc
gatgcggccgagccggcgcccgtcgccggcggcattcccgaggtttcagggcaatccgtg
cctgtgccgccgcgcgcgaaggctggcgtcgaaggcgccttttcccctgccgatcttgcc
aaggcccgggccgaggcctttgcggcgctgcccttcgatcattccgcctatgtgacgatc
cgcgatctcgccacgctcgaccgatggatcgccgatgcgcgcgacaccggtctcgtggct
ttcgataccgagaccacctcgcttgacgccatgcaggccgagctcgtcggcttctcgatg
gcgatcgccgacaatgtcgccgatcccaccggcacgaagatccgcgccgcctatctgccg
cttgcccacaagaacggagtcggcgatctgctcggcggcggccttgccgaaaatcaggtc
cccatgcgtgatgcgctgccgcggctgaaggcgctgctggaggatgaatcggttctgaag
gtcgcccagaatctgaaatacgactatttgctgttgaaacgttatggcatcgagaccaag
agtttcgacgacacgatgctgatctcctatgtgctcgacgccggcaccggcgcccatggc
atggacccgctgtcggaaaaattcctcggccatacgccgatcccctataaggacgtggcc
ggtagcggcagggcgaacgttaccttcgatctggtcgatatcgatcgcgccacccattat
gccgccgaagatgccgatgtgacgctgcgcctctggctggtgctgaagccgcggctggtg
gcagccgggctgaccagcgtttatgaacggctggagcggccgctgctgccggtgctggcg
cggatggaagcgcgggggatcaccgtcgaccggcagatcctgtcgcgcctgtccggcgaa
ctggctcaaggtgcggcgcgcctggaggacgagatctacacgctggccggcgagcgtttc
aatatcggctcgccaaagcagctcggggatatcctgttcggcaagatgggtcttgccggc
ggcagcaagacgaagaccgggcaatggtcgacctccgcctcggtgctcgaggatctcgcc
gccgccgggttcgaactgccgcgcaagatcgtcgactggcgccagctcaccaagttgaaa
tcgacctacacggatgcgcttcccggctatgtgcatccggagaccaagcgggttcacact
tcctactcgctggcctcgaccacgacaggtcgcctgtcttcctcggaaccgaacctgcag
aatattccggtgcgcaccgccgaaggccgcaagatccgcaccgccttcatatcgacaccg
ggtcacaagctgatttccgccgattacagccagatcgaactgcgcgtgcttgcccatgtg
gccgagatcccgcagttgaccaaggccttcgaggatggcgtcgacatccatgcgatgacc
gcctcggaaatgttcggcgtgccggtggagggcatgccgggcgaggtgcgccgccgcgcc
aaggcgatcaatttcggcatcatctacggcatttcggccttcggccttgccaatcagctg
tcgatcgagcggtcggaagctggcgactatatcaagaaatatttcgagcgttttcccggc
atccgcgactatatggaaagccgcaaggccatggcgcgcgacaaagggtatgtcgagacg
atcttcggccggcgaatcaactatcccgaaatccgctcgtccaatccctccgtgcgcgcc
ttcaacgagcgggctgcaatcaacgcgccgatccagggctcggccgccgacgtcatccgc
cgggcgatgatcaagatcgagccggcgctggctgaagccggcctcgctgagcgcgtccgc
atgctgctgcaggtgcatgacgaattgatcttcgaagtcgaggatgaggatgtcgacaag
gcgatgccgatcatcgtctcggtcatggaaaacgccaccatgccggccctcgaaatgcgt
gtgccgctcaaggtggatgcgcgcgctgccaccaattgggacgaggcgcattga
DBGET
integrated database retrieval system
