Rhizobium etli CIAT 652: RHECIAT_CH0000264
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Entry
RHECIAT_CH0000264 CDS
T00720
Name
(GenBank) probable ABC transporter, substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rec
Rhizobium etli CIAT 652
Pathway
rec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RHECIAT_CH0000264
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rec02000
]
RHECIAT_CH0000264
Transporters [BR:
rec02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RHECIAT_CH0000264
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACE89259
UniProt:
B3PYA8
LinkDB
All DBs
Position
complement(279717..281246)
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AA seq
509 aa
AA seq
DB search
MNKVSFAPSARFVRRLSLGVALSAGLMVTAMTPAEAANTGLKLGMSVEPTGLDPTIAAPV
AIGQVTWQNVFEGLVRIDQTGKVQPQLAKSWEVSPDGLTYAFKLQTGVKFHDGEAFDAAS
AKFSLDRARGADSVNPQKRFFASIASIDTPDAETLVLHLSAPTGSLIYWLGWPASVMVAP
KTAADDRVTPIGTGPFKFVSWAKGDRVELARNADYWNKDAAAKLDKVTFRFIADPQAQAA
ALKSGDLDAFPEFAAPELMSSFDGDARLVTRIGNTELKVVAGMNNAKKPFDDKRVRQALM
MAIDRKTVIDGAWSGLGTPIGSHYTPNDPGYQDTTGVLPYDVGKAKALLAEAGYPNGFTF
TIKSPQMAYAPRSAQVMQAMFAEIGVTMNIEPTEFPAKWVQDIMKDRNFDMTIVAHAEPL
DIDIYARDPYYFNYKNPAFNALMKKVQETTDPAAQNAIYAQAQKILAEDVPALYLFVMPK
LGVWDRKLKGLWENEPIPSNVLSGVSWEE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaataaggtttcgtttgcgccgtcggcacgtttcgtccggcggctttccctcggcgtt
gcgctttcggccggtctcatggtgacggcgatgacgccggcggaagcggcgaacaccggc
ctcaagcttggcatgagcgtcgagccgaccggcctcgacccgacgatcgccgcacccgtc
gcaatcggccaggtcacctggcagaacgtgttcgagggactggtgaggatcgaccagacc
ggcaaggtccagccgcagcttgcgaaaagctgggaggtctcgcccgatggcctgacctac
gcattcaagctgcagaccggcgtcaaattccacgacggcgaggctttcgacgccgccagc
gccaagttttcgctcgaccgcgctcgcggtgcggattcggtcaatccgcagaagcgcttc
ttcgcctcgatcgcctcgatcgatacgcccgatgcggaaacgctggtgctgcatctgtcg
gcgccgaccggcagcttgatctactggctcggctggccggcttcggtgatggtcgcgccg
aaaaccgctgcggacgacagggtgacgccgatcggcaccggccccttcaaattcgtcagc
tgggcaaagggcgacagggtcgaactcgccaggaatgccgactactggaacaaggatgcg
gccgccaagctcgacaaggtgaccttccgcttcatcgccgatccacaggcgcaggccgcc
gcgctgaaatccggcgatctcgacgcctttccggaatttgccgcacccgagctgatgagt
tcgttcgacggcgatgccaggctcgtgaccaggatcggcaataccgagctcaaggtcgtc
gccggcatgaacaatgccaagaagcctttcgacgacaagcgcgtgcgccaggcgctgatg
atggcaatcgaccgcaagacggtgatcgacggcgcgtggtcgggcctcggcacgccgatc
ggcagccactacacgccgaacgatccgggctatcaggacacgaccggcgtgctgccctat
gacgtcgggaaggccaaggcgctgctggccgaagccggctatcccaacggcttcaccttc
acgatcaaatcgccgcagatggcttacgcgccgcgcagcgctcaggtgatgcaggcgatg
tttgccgagatcggtgtgacgatgaatatcgagccgaccgaatttccggcgaaatgggtc
caggacatcatgaaggaccgcaacttcgacatgacgatcgtcgcccatgccgagccgctc
gacatcgacatctacgcgcgcgatccctattatttcaattacaagaaccctgctttcaac
gcactgatgaagaaggtccaggagacgaccgatcccgccgcgcagaacgcgatctatgcg
caagcacagaagatcctcgccgaggacgtaccggcgctctacctcttcgtcatgccgaaa
ctcggtgtctgggacaggaagctgaaggggctgtgggagaacgagccgattccttccaat
gtgctgtccggggtttcctgggaggagtga
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